| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3838 |
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| Symbol | |
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| ID | 8227432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4676329 |
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| End bp | 4677147 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644931678 |
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| Product | Phytanoyl-CoA dioxygenase |
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| Protein accession | YP_003088207 |
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| Protein GI | 255037586 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.591246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACAC TTCAGGAGCT GTTCAACCGC GATGGTTATG TCCTTTTGAG AAACTACCTC
GACAAGGACG TCATTAACAA AATATACACC GAAGCCCGCC AGATTTTCGC GACGCAGATC
AAGCGCGTAA CGGGCAAAAC CGTCGATATC GACGACAAGG ACACTTTCGA AAACGCAATG
TTCGAGTTCT TCGAAAAGGA TTTCGATGGA TTTGTAAGTA CCGGCAAAAC GGTCCAGCAT
TCATTCTCGC TGCACCGCCT GGGTGTGGAC CCGGTTATTG AAAACTTGTT GAAAGACGTA
GGCCTTTCGG CGCCCATTAT CGGTGCACGG GCAGCGATGC AGTTCAACAG CCGCTTTTTG
TCCAAAGACG GCAGCAAGCA CTGGAAACTG GACGCGCACC AGGACTGGCG CACCGGCCAG
GGCTCGCTCG ACAGCGCCGT GATCTGGTTC CCGATGGTGG ATGCCGGCGC GGACATCGGC
GCATTGCAGG TGATCCCGGG CAGCCACAAG ATCGGCTTGC AGGCTTCGTC CACTTCCGGT
TATCAGGGAG GTATTACGGT TGAGTTAAAG GATGAAGATT TCGTCCAAAC GGAATTCCGG
GTGGGTGACA TCCTCATCTT CTCGGCATTC CTGATCCACC AGTCGGGGAA CAACATCACG
AACAACATCC GCTGGTCGGT GCAGCTCCGC TACAACAACC TCGACGAACC TACCTTCATC
GAGCGCGGCT ACCCGATGGC GTACATTTAC AAACCCGAAA CAGAGCTCGT AACCCCGGAT
TTCCCGACGG TAGAGCAGCT GAAAGAGGTT TTTAGCTGA
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| Protein sequence | MSTLQELFNR DGYVLLRNYL DKDVINKIYT EARQIFATQI KRVTGKTVDI DDKDTFENAM
FEFFEKDFDG FVSTGKTVQH SFSLHRLGVD PVIENLLKDV GLSAPIIGAR AAMQFNSRFL
SKDGSKHWKL DAHQDWRTGQ GSLDSAVIWF PMVDAGADIG ALQVIPGSHK IGLQASSTSG
YQGGITVELK DEDFVQTEFR VGDILIFSAF LIHQSGNNIT NNIRWSVQLR YNNLDEPTFI
ERGYPMAYIY KPETELVTPD FPTVEQLKEV FS
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