10 homologs were found in PanDaTox collection
for query gene Strop_1997 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_1997  hypothetical protein  100 
 
 
325 aa  660    Salinispora tropica CNB-440  Bacteria  normal  normal  0.179007 
 
 
-
 
NC_011004  Rpal_3157  hypothetical protein  24.61 
 
 
306 aa  103  5e-21  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_012849  Rpic12D_5160  hypothetical protein  26.42 
 
 
302 aa  97.8  2e-19  Ralstonia pickettii 12D  Bacteria  normal  normal  0.651921 
 
 
-
 
NC_010084  Bmul_0497  hypothetical protein  25.34 
 
 
303 aa  75.5  0.000000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_1821  response regulator receiver domain-containing protein  22.22 
 
 
304 aa  68.6  0.0000000001  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4341  hypothetical protein  23.51 
 
 
302 aa  62.8  0.000000008  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013721  HMPREF0424_0870  hypothetical protein  22.18 
 
 
298 aa  54.3  0.000002  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_007204  Psyc_1616  hypothetical protein  20.38 
 
 
292 aa  52.4  0.00001  Psychrobacter arcticus 273-4  Bacteria  normal  0.977694  normal 
 
 
-
 
NC_007595  Synpcc7942_B2656  hypothetical protein  21.86 
 
 
304 aa  50.8  0.00003  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B2407  hypothetical protein  22.28 
 
 
227 aa  43.9  0.003  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000243807  normal  0.0667541 
 
 
-
 
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