| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0870 |
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| Symbol | |
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| ID | 8709524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 983232 |
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| End bp | 984128 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 646482970 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374087 |
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| Protein GI | 283783333 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAGTA TTGTTTTAGA ATTACAGAAT GAAATTGTGT CATCAAATTG CGATGTTGTT
AATATATTAC GCAAAGCACA TTTGATTGCA TCAAAATTAA AGCTTGCTGA TTTTGATCAA
TGGATTCAAC ACGAATTAAA TGGTTATCCT GACCCAGAAT CTTGCCCTGA GTATAGAAAG
GTTCGTGGAA GTTTAAAAAC TTTCAATCCT TATCGCGGTT GGATTCCAAC CTCAATACAG
GATAATGAAT ACGAAAAAAA GATTTGTGAA AGAAAGTTAG TAAATTCAAT TTCTGAAATC
ATTTCTTTAT GTCAGTCCTC AGGAAATGTA TTAACTTTAG ATTTTTCAGG CGAACAACTT
GCATTGTTTG ATAAAATGGC TGATTCGCTA CTTCCAATGG ATTATGCATT ACATGTACCT
ACAACTGCAG TTAAAGACAT TGAAGAAAAA GTCAAAAATA CTATTTTAGA ATGGACATTG
AAATTAGAAT CGGAAGGTAT TGTAGGGGAA AATATGGTTT TCTCTGAGAC TGAAAAAGAA
TCCGCAGTGA ACATGCCGCA AACCGTGAAT AATTATTACG GGAATACAAG TGTGATCAAT
TCGCCATCCG ATAATGTACA GATAGTGTCT GGAAGTGAGA ATACAGTTAC ATTTTCCTAT
GATAAAGTTA AGGATGTAGT TGATGCCGTT GAAAAAAGTA TTAGTGAATC TGATTTATCA
AAAGAGGATA TAGAAACCGC AACAGAATTA TTAGCTGACA TCAAATTAAA AATTGAAGAA
GAGAAGAAAC CGCATATTTT AAAATCAGCA TTGGTTGGAC TAAAAGACTT TTTAATTAAT
ACAGGTGCCA GCGTTACTGC AGTGTTAATA CAAGCTCAAA TACAAGGTTT GTTCTAA
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| Protein sequence | MGSIVLELQN EIVSSNCDVV NILRKAHLIA SKLKLADFDQ WIQHELNGYP DPESCPEYRK
VRGSLKTFNP YRGWIPTSIQ DNEYEKKICE RKLVNSISEI ISLCQSSGNV LTLDFSGEQL
ALFDKMADSL LPMDYALHVP TTAVKDIEEK VKNTILEWTL KLESEGIVGE NMVFSETEKE
SAVNMPQTVN NYYGNTSVIN SPSDNVQIVS GSENTVTFSY DKVKDVVDAV EKSISESDLS
KEDIETATEL LADIKLKIEE EKKPHILKSA LVGLKDFLIN TGASVTAVLI QAQIQGLF
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