Gene Sde_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1821 
Symbol 
ID3966805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2313679 
End bp2314593 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content41% 
IMG OID637920904 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_527293 
Protein GI90021466 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGA TAAATGAGAT TATTGACACT CTCAGCTCGG ATACTGGGAA GTTAAGTGAC 
GCTCTGATTA AGACGAAAGT TTTGCTTCAT AAAATTGGCC ATAAAGAGCT AGTACCATGG
GTAAATAACG AGCTTAACGG ATACCCTGAT AGGGATTCTG TACCGGATTA CAGAATATTG
CCCGCACAAG TTTTGGTGAA CGCTTCAAAT GGAGCGTACA GAGCAACATC TCAACACATC
CCTATGGGGC ACCTTGAGGA AAAGCATAGA GAAGCAATAG AGACCGCGAG AATGGATCAA
TCGTTGGCGG TTCTGGAAAA ATTTATAGAA AAAGATGCTG GGCATTTGCA AGCACATATA
CCGATGGAGT CATATGGTCT ATTGGGCAAG GGTCTTGACA ATGGCTATCA AATAGAAAGT
GCGTGGTCGG AGATAAGTCT CACGAGCGTT TTGCAAATGC TAACTCAGGT TCGCTCGCGT
CTGTTGGATT TTGTCTTAGA GTTGAACGAT CAATTTCCGA GTGAGTTGAA TGAAGATCAA
GTGAAAGAGC GTATCAGTAG CGTAGATACA GAGAACCTTT TTAATAATGC AATCTTTGGC
GATAACACAA CGATACTTGT TGGTAGCAGA AATTCCCAGA ATGTCTCGAA TGTAAGTATA
AAAGGTGATT TTAGTGCACT AGCTGAAACT CTAGAAAAGA ATGGAATATC AGAATCGGAT
ATTTCTTTGT TAAAGGATGC TATCGATGAG GATTCATCAA TAGTAAATAA CGAATCAAAG
GAGTTTGGAC CGGCAGTTAA ATCTTGGTTG CAAATGATGC TGTCTAAAGC CGTTGAGGCA
TCTTGGAATA TTGAGCTAGG AGTTGCAAGC AGTCTTTTGG CGACAGCGTT AAATAGTTTC
TATGGCTGGT TCTAA
 
Protein sequence
MKLINEIIDT LSSDTGKLSD ALIKTKVLLH KIGHKELVPW VNNELNGYPD RDSVPDYRIL 
PAQVLVNASN GAYRATSQHI PMGHLEEKHR EAIETARMDQ SLAVLEKFIE KDAGHLQAHI
PMESYGLLGK GLDNGYQIES AWSEISLTSV LQMLTQVRSR LLDFVLELND QFPSELNEDQ
VKERISSVDT ENLFNNAIFG DNTTILVGSR NSQNVSNVSI KGDFSALAET LEKNGISESD
ISLLKDAIDE DSSIVNNESK EFGPAVKSWL QMMLSKAVEA SWNIELGVAS SLLATALNSF
YGWF