| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3157 |
|---|
| Symbol | |
|---|
| ID | 6410827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 3404526 |
|---|
| End bp | 3405446 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642713035 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001992136 |
|---|
| Protein GI | 192291531 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGT TGGACGAAAT TGCATCCGAC GCTATTGACG ACACAACCTC ACTATCGGTT
CTTTTGCGCA AGTGTTTGCT TCTCGCTCAT CACTTAAAGA ATGATAAGCT GAAGGCGTGG
GCTGACCAAG AATTGAACGG TTACTCGGAC GCCGATGCAC TGCCGCCCTA CAGAAAAATT
CGGATCACGG CGACCGGTAG CTTCGCTGGC CCTTTCGGTA ATGTCTTGAA CAATCAGCCC
TTGGCTTCCA GCATCCTCAA CAAGGACCAT AGGCATTGGG CAGAAAGCGC CAACCTCACC
CAGCCGATCG CCGCTTACGA CATTGGCAAA GATGAGAACG GCACTCCGCA GGGAGGGCGA
ATTCAGTGGC CGGCTGACCT TGTAACTCTC TACGCAGAGT CCTTCATCCA AGGATGGCAT
CTTATTCGAG CATCACAGCA GATCCCTGGA ACCGTTTTTG TCTCGATTAT CGATACTGTC
CGTACCCGAA TCCTTCAACT CGCTATCGAA TTGAACGAGG GACTCGGCGA AGACGACAAG
AGTGCCCTGA GCGACCTCTC GCCAAAGAAG GTGGACCAAT CCGTAATCAA TCATATTTAC
GGCGGCAATA ACGTGATTGC TACTCACGCG GAGAATTTCG CGCAGATCGG CGCCATCAAC
GTGTCGTCAG GCAATATTGG CGAGTTGGAG AAAGCGCTGG CTGGTCTCGG GCTTGACGAC
CGCGCCATCT CAACACTCCG TCAGGCCATG GATGCCGACG CCAAGCACGA CGGCGGCAAG
CCTACTATTG GACAAAGGAC GTTAGGCTGG CTGACGAACG CCGCATCCTA CACGTCTAAG
GAAGGTCTCA AGGTCGGCTT TGAAATTGCG AGGAAGACAG CTACAAAATG GATTATGCAG
TACTATGGCT TGGACGTCTG A
|
|---|
| Protein sequence | MKLLDEIASD AIDDTTSLSV LLRKCLLLAH HLKNDKLKAW ADQELNGYSD ADALPPYRKI
RITATGSFAG PFGNVLNNQP LASSILNKDH RHWAESANLT QPIAAYDIGK DENGTPQGGR
IQWPADLVTL YAESFIQGWH LIRASQQIPG TVFVSIIDTV RTRILQLAIE LNEGLGEDDK
SALSDLSPKK VDQSVINHIY GGNNVIATHA ENFAQIGAIN VSSGNIGELE KALAGLGLDD
RAISTLRQAM DADAKHDGGK PTIGQRTLGW LTNAASYTSK EGLKVGFEIA RKTATKWIMQ
YYGLDV
|
|---|
| |