10 homologs were found in PanDaTox collection
for query gene Sros_3257 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_3257  hypothetical protein  100 
 
 
354 aa  716    Streptosporangium roseum DSM 43021  Bacteria  normal  0.472652  normal  0.371735 
 
 
-
 
NC_008697  Noca_4793  phage integrase family protein  36.86 
 
 
797 aa  149  7e-35  Nocardioides sp. JS614  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2264  phage integrase family protein  36.86 
 
 
797 aa  149  7e-35  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2973  phage integrase family protein  36.86 
 
 
797 aa  149  7e-35  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2148  hypothetical protein  33.67 
 
 
518 aa  138  1e-31  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0992  phage integrase family protein  33.67 
 
 
806 aa  112  7.000000000000001e-24  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3610  integrase family protein  29.79 
 
 
827 aa  109  9.000000000000001e-23  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.00523009  normal  0.0387105 
 
 
-
 
NC_009077  Mjls_5286  putative DNA integrase/recombinase  31.72 
 
 
650 aa  107  2e-22  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008537  Arth_4521  phage integrase family protein  31.67 
 
 
803 aa  103  6e-21  Arthrobacter sp. FB24  Bacteria  normal  0.0704652  n/a   
 
 
-
 
NC_007777  Francci3_3533  hypothetical protein  31.03 
 
 
287 aa  50.1  0.00006  Frankia sp. CcI3  Bacteria  normal  0.401883  normal  0.19863 
 
 
-
 
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