Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2264 |
Symbol | |
ID | 4597810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 2414985 |
End bp | 2417378 |
Gene Length | 2394 bp |
Protein Length | 797 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639776863 |
Product | phage integrase family protein |
Protein accession | YP_923456 |
Protein GI | 119716491 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCAGCG AGCAGCTGAA GGTCGCCGGG CCGTACTACC GCGAGCATCC CGAGCTGGTG GACCAGGTCT TCGCCGGGCC ACACGACACC GCGGTGAAGG ACGAGGTCTT GCGGCTGGTG GCCAAACTCC CGGACTGGCC GGTGACCGAG TACGCGAGCA ATCGGCTGCT GGAAGGGGCA GATTGGGTGC TCGACTGGCT GCTCATCTTC CCCGGGGCCG GTTGGCGCGA CCGATGGGTT GCGGCCGGTG CCGACACGAA CCCGCTGGGC TGGCTGCCCG AGCGCCACGG CGAGGACCAC CGCGACCCGA AGACGGTGCG CCAGATCGCA GTCGCAGGGA TGCGCACCCT GATCGTGTCG CGGGTGGTCC TGCCCGGCCA CGAGTTCTTC GCGACCTGGA AGACCAAGGG CTATCAACAG GTCCTGGTGC AGCAAGATCC CGCCCTAATC GCCCGGATCG AGGCGTTCGC CGAGCAGCAT CAGATCAGCC GTCGCCAACA GCGCGACGTC TGGACGGTAC TGGCCAGGAT CATGCTCCAC ACCGGCAAAG ACCTCCAGGA CGTCAGCGCC GAGGACCTCT TCGAGCTGCG GGCCCACTAC CGGGAGAAGC ACGGAGTCCC CGCCGCCGGA CTGGGACAGA CCTGGACCCT GCTGGCCGGG GTCGGCATCT TGCCCAAGGA CTCCTCCCTG CGTGCCGCGC TGCGCGTGGG GCAACGCACC CCCGCCGAGC TGGTCGACCG CTACGGGCTC GCTCCCGGGC CCGTGCGTGA CCTGCTGGTG CGCTACCTGG CCGAACGGAA GACCAACGTC GACTACACCA CCTTGAAGTC GCTCGCGCGG ATGCTGGCCG GCAACTTCTG GGCCGACCTG GAGCGCCACC ACCCCGAACT CGCCGGGAGC GACACCCTGG CCCTGCCCAA GACGACGGTG ACCGCCTGGA AGGAGCGCCT GGCCGTCATC GTCGCCCCCG ACGGGTCGAG GAGGCCGCGA GCCGACTTCC TCGACGTGCT GCTCACCGTG CGCTGCCTCT ACCTGGACCT ACGTGACTGG GCGCTCGATG ACGCCACGCT CGCACCATGG GTGGTGGCCT CACCAGTCAC CCGCGCCGAC GTGGCCGGCA ACAAGAAACG GAAGCTGGCC CATCAAGCCC GCATCCACCA GCGCATCCGC GAACGAGTGC CGCTGGTCCC GCGGATGCTC GCCAGGCTGG AACAGGACCG CCGCGACGCC GAGGCGATGC TGGCCCTGGC CAAGCAGACA CCTGCCGATG CCTCATTCAA CTTCAACGGT CGCACCTATC AGCGGATCAG CACCCGGATC CGTGGCGGCC GCGGCCTACC TCCCGACCTG GCCTACGACG TGGTCTGCGT TGAGACCGGC GAACGCTTCA GCGTCGGCCG GACCGAGGAG GACGCATTCT GGCTGTGGGC GGTCGTGGAG ACGCTGCGAC ACAGCGGTGT GCGCCTGGAG GAACTCCTCG AGCTCACCCA CCTTGCGCTG GTGTCTCACC GGCTGTCCAC CACCGGCGAG CTCGTCCCGC TGCTGCAGAT CGTCCCGTCG AAGACGAACG AGGAACGACT GCTCCTGGTC ACCCCCGACC TTGCCCGCGT CCTGGCCGAG ATCATCAGCA GACTGCGCAA CCGCTACAAC GGAGCCGTAC CGCTGGTCGC GCGCTACGAC AACTACGAAG CCACCACCGG GCCACCACTG CCGCACCTGT TCCAGCGTGA CTACGGCTCC GGTCCGACGG CGATGAGCCC AACCATGGTC CGAGTCACCC TGCGGGAGGT GGCCGACCGG ATGGGCCTGA CCGACACCGC AGGCAACCCC ATGCACCTGA CCCCGCACGA CTTCCGACGG GTCTTCACCA CCACTGCCGT CCAAGACGGA CTGCCGCTGC ACATCGCCTC GCGGATCCTC GGGCACCGCC ACCTCAACAG CACCCAGCCC TACACCGCCG TCTTCCAAGA CGACCTAATC CGCACCTTCC GAACCTTCGT CGATCGCCGC CGATCAGCGC GACCGGCCGA GGAATACCGC GAGCCCACCC CCGAAGAGTG GGACGAGTTC GAGGAACACT TCGCCCTGCG CCGTGTCGAG CTCGGCTCCT GTGCCCGGCC CTACGGGTCG AGCTGCGAAC ACGAGCACGC CTGCATCCGC TGCCCCGTCC TGCGTGTCGA CCCCGCCCAG CTCGACAGAC TCGAAGCCAT CGCAGCCAGC CTCCTACAAC GCATCACAGA AGCCGAGGAA CGCGGTTGGC CCGGTGAGGT CGAACAACTC ACGATCAGCC TGCGCGCCGC CCAAGACAAG ATCTTGGCCA CCGCACCACC TCGCAAGGGC AGCGTGTTCC TGGGAGATCC AGCCATACCC CCGACGAACG CGCCGCAAGC CTGA
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Protein sequence | MTSEQLKVAG PYYREHPELV DQVFAGPHDT AVKDEVLRLV AKLPDWPVTE YASNRLLEGA DWVLDWLLIF PGAGWRDRWV AAGADTNPLG WLPERHGEDH RDPKTVRQIA VAGMRTLIVS RVVLPGHEFF ATWKTKGYQQ VLVQQDPALI ARIEAFAEQH QISRRQQRDV WTVLARIMLH TGKDLQDVSA EDLFELRAHY REKHGVPAAG LGQTWTLLAG VGILPKDSSL RAALRVGQRT PAELVDRYGL APGPVRDLLV RYLAERKTNV DYTTLKSLAR MLAGNFWADL ERHHPELAGS DTLALPKTTV TAWKERLAVI VAPDGSRRPR ADFLDVLLTV RCLYLDLRDW ALDDATLAPW VVASPVTRAD VAGNKKRKLA HQARIHQRIR ERVPLVPRML ARLEQDRRDA EAMLALAKQT PADASFNFNG RTYQRISTRI RGGRGLPPDL AYDVVCVETG ERFSVGRTEE DAFWLWAVVE TLRHSGVRLE ELLELTHLAL VSHRLSTTGE LVPLLQIVPS KTNEERLLLV TPDLARVLAE IISRLRNRYN GAVPLVARYD NYEATTGPPL PHLFQRDYGS GPTAMSPTMV RVTLREVADR MGLTDTAGNP MHLTPHDFRR VFTTTAVQDG LPLHIASRIL GHRHLNSTQP YTAVFQDDLI RTFRTFVDRR RSARPAEEYR EPTPEEWDEF EEHFALRRVE LGSCARPYGS SCEHEHACIR CPVLRVDPAQ LDRLEAIAAS LLQRITEAEE RGWPGEVEQL TISLRAAQDK ILATAPPRKG SVFLGDPAIP PTNAPQA
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