| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3533 |
|---|
| Symbol | |
|---|
| ID | 3904472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 4222158 |
|---|
| End bp | 4223021 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637880854 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_482614 |
|---|
| Protein GI | 86742214 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.401883 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.19863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACCG CGGTCGCGGC CCCAGCCACC AAGCAGGCCA TCGGCCCAGG GGCGTCGGGC
TGGGAGCCGG CCGCGCGGCC GGTCGGCCCG TGGGATACGG CGTCGTTGGA CGACGTGCTC
GCGGCTGTGC CGACCTTGTC GTGGTGGAAC GCGAAGCGGC AGCAGGCGCA GCGGTCGGTT
GCCGGTGTCG AACTGCTGCT GGACTGGCTG GGCCGGGTGC CCGGCGGCTG GCAGGACCGG
TGGGAGCATG CCGAGGCGAT GCTCGGTCCC AGGTGGGCGA CCTGGTCAGC CGCCATTCCC
GAGCCCGACA GGCCCTGCGG CGAACGCCAT CGCGTGGTGC TGACCCGAGG GCTGGCCTGT
CTGCTGCGGA TGAGGCTCGT CCGGCCGAGC TACCCGTTCC TGACCACCTA CGGGCCGACG
ACGACGTTCG CGGTCGTCCG CGACCTGGTG AGCCCGGAGT TGTTCGCCTG CGCGGCCGAC
GCCGCGCGGG CGTGTGGCGG CCATTCCGAG AACGTGCTCA GGAAGGCGCT GAACGTCCTG
ACCGCGATCG TGATCCATAC CGGTGGCAGC CTGAACGAGG TGACCACAGG CGACCTCCTC
GCGTTCCAGT CAGCCACGGC GCCCAGCCGT GGCAGCAAGA TCAAAATCCG GATAAGTCGG
GCCGTGGGAC CTGCCCCCGG CCTGGTTCGA CCAACTCGCC CCCGGCGGTA CGCTCGTGGT
CCCGCTGCAC TGGCGGGGCC AGGCCCGCAG TGTCGCCTTC GCCCGTCAGG ACACCCATCT
CCGGGCGGAA AGCAGCCAGC TCTGCGGGTT CATTCCCATG ATCGGTATCG TGTCGACCGG
CGAGCAGACC GGCACGATCA CTGA
|
|---|
| Protein sequence | MPTAVAAPAT KQAIGPGASG WEPAARPVGP WDTASLDDVL AAVPTLSWWN AKRQQAQRSV
AGVELLLDWL GRVPGGWQDR WEHAEAMLGP RWATWSAAIP EPDRPCGERH RVVLTRGLAC
LLRMRLVRPS YPFLTTYGPT TTFAVVRDLV SPELFACAAD AARACGGHSE NVLRKALNVL
TAIVIHTGGS LNEVTTGDLL AFQSATAPSR GSKIKIRISR AVGPAPGLVR PTRPRRYARG
PAALAGPGPQ CRLRPSGHPS PGGKQPALRV HSHDRYRVDR RADRHDH
|
|---|
| |