| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2973 |
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| Symbol | |
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| ID | 4595611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3158470 |
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| End bp | 3160863 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639777578 |
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| Product | phage integrase family protein |
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| Protein accession | YP_924162 |
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| Protein GI | 119717197 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCAGCG AGCAGCTGAA GGTCGCCGGG CCGTACTACC GCGAGCATCC CGAGCTGGTG
GACCAGGTCT TCGCCGGGCC ACACGACACC GCGGTGAAGG ACGAGGTCTT GCGGCTGGTG
GCCAAACTCC CGGACTGGCC GGTGACCGAG TACGCGAGCA ATCGGCTGCT GGAAGGGGCA
GATTGGGTGC TCGACTGGCT GCTCATCTTC CCCGGGGCCG GTTGGCGCGA CCGATGGGTT
GCGGCCGGTG CCGACACGAA CCCGCTGGGC TGGCTGCCCG AGCGCCACGG CGAGGACCAC
CGCGACCCGA AGACGGTGCG CCAGATCGCA GTCGCAGGGA TGCGCACCCT GATCGTGTCG
CGGGTGGTCC TGCCCGGCCA CGAGTTCTTC GCGACCTGGA AGACCAAGGG CTATCAACAG
GTCCTGGTGC AGCAAGATCC CGCCCTAATC GCCCGGATCG AGGCGTTCGC CGAGCAGCAT
CAGATCAGCC GTCGCCAACA GCGCGACGTC TGGACGGTAC TGGCCAGGAT CATGCTCCAC
ACCGGCAAAG ACCTCCAGGA CGTCAGCGCC GAGGACCTCT TCGAGCTGCG GGCCCACTAC
CGGGAGAAGC ACGGAGTCCC CGCCGCCGGA CTGGGACAGA CCTGGACCCT GCTGGCCGGG
GTCGGCATCT TGCCCAAGGA CTCCTCCCTG CGTGCCGCGC TGCGCGTGGG GCAACGCACC
CCCGCCGAGC TGGTCGACCG CTACGGGCTC GCTCCCGGGC CCGTGCGTGA CCTGCTGGTG
CGCTACCTGG CCGAACGGAA GACCAACGTC GACTACACCA CCTTGAAGTC GCTCGCGCGG
ATGCTGGCCG GCAACTTCTG GGCCGACCTG GAGCGCCACC ACCCCGAACT CGCCGGGAGC
GACACCCTGG CCCTGCCCAA GACGACGGTG ACCGCCTGGA AGGAGCGCCT GGCCGTCATC
GTCGCCCCCG ACGGGTCGAG GAGGCCGCGA GCCGACTTCC TCGACGTGCT GCTCACCGTG
CGCTGCCTCT ACCTGGACCT ACGTGACTGG GCGCTCGATG ACGCCACGCT CGCACCATGG
GTGGTGGCCT CACCAGTCAC CCGCGCCGAC GTGGCCGGCA ACAAGAAACG GAAGCTGGCC
CATCAAGCCC GCATCCACCA GCGCATCCGC GAACGAGTGC CGCTGGTCCC GCGGATGCTC
GCCAGGCTGG AACAGGACCG CCGCGACGCC GAGGCGATGC TGGCCCTGGC CAAGCAGACA
CCTGCCGATG CCTCATTCAA CTTCAACGGT CGCACCTATC AGCGGATCAG CACCCGGATC
CGTGGCGGCC GCGGCCTACC TCCCGACCTG GCCTACGACG TGGTCTGCGT TGAGACCGGC
GAACGCTTCA GCGTCGGCCG GACCGAGGAG GACGCATTCT GGCTGTGGGC GGTCGTGGAG
ACGCTGCGAC ACAGCGGTGT GCGCCTGGAG GAACTCCTCG AGCTCACCCA CCTTGCGCTG
GTGTCTCACC GGCTGTCCAC CACCGGCGAG CTCGTCCCGC TGCTGCAGAT CGTCCCGTCG
AAGACGAACG AGGAACGACT GCTCCTGGTC ACCCCCGACC TTGCCCGCGT CCTGGCCGAG
ATCATCAGCA GACTGCGCAA CCGCTACAAC GGAGCCGTAC CGCTGGTCGC GCGCTACGAC
AACTACGAAG CCACCACCGG GCCACCACTG CCGCACCTGT TCCAGCGTGA CTACGGCTCC
GGTCCGACGG CGATGAGCCC AACCATGGTC CGAGTCACCC TGCGGGAGGT GGCCGACCGG
ATGGGCCTGA CCGACACCGC AGGCAACCCC ATGCACCTGA CCCCGCACGA CTTCCGACGG
GTCTTCACCA CCACTGCCGT CCAAGACGGA CTGCCGCTGC ACATCGCCTC GCGGATCCTC
GGGCACCGCC ACCTCAACAG CACCCAGCCC TACACCGCCG TCTTCCAAGA CGACCTAATC
CGCACCTTCC GAACCTTCGT CGATCGCCGC CGATCAGCGC GACCGGCCGA GGAATACCGC
GAGCCCACCC CCGAAGAGTG GGACGAGTTC GAGGAACACT TCGCCCTGCG CCGTGTCGAG
CTCGGCTCCT GTGCCCGGCC CTACGGGTCG AGCTGCGAAC ACGAGCACGC CTGCATCCGC
TGCCCCGTCC TGCGTGTCGA CCCCGCCCAG CTCGACAGAC TCGAAGCCAT CGCAGCCAGC
CTCCTACAAC GCATCACAGA AGCCGAGGAA CGCGGTTGGC CCGGTGAGGT CGAACAACTC
ACGATCAGCC TGCGCGCCGC CCAAGACAAG ATCTTGGCCA CCGCACCACC TCGCAAGGGC
AGCGTGTTCC TGGGAGATCC AGCCATACCC CCGACGAACG CGCCGCAAGC CTGA
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| Protein sequence | MTSEQLKVAG PYYREHPELV DQVFAGPHDT AVKDEVLRLV AKLPDWPVTE YASNRLLEGA
DWVLDWLLIF PGAGWRDRWV AAGADTNPLG WLPERHGEDH RDPKTVRQIA VAGMRTLIVS
RVVLPGHEFF ATWKTKGYQQ VLVQQDPALI ARIEAFAEQH QISRRQQRDV WTVLARIMLH
TGKDLQDVSA EDLFELRAHY REKHGVPAAG LGQTWTLLAG VGILPKDSSL RAALRVGQRT
PAELVDRYGL APGPVRDLLV RYLAERKTNV DYTTLKSLAR MLAGNFWADL ERHHPELAGS
DTLALPKTTV TAWKERLAVI VAPDGSRRPR ADFLDVLLTV RCLYLDLRDW ALDDATLAPW
VVASPVTRAD VAGNKKRKLA HQARIHQRIR ERVPLVPRML ARLEQDRRDA EAMLALAKQT
PADASFNFNG RTYQRISTRI RGGRGLPPDL AYDVVCVETG ERFSVGRTEE DAFWLWAVVE
TLRHSGVRLE ELLELTHLAL VSHRLSTTGE LVPLLQIVPS KTNEERLLLV TPDLARVLAE
IISRLRNRYN GAVPLVARYD NYEATTGPPL PHLFQRDYGS GPTAMSPTMV RVTLREVADR
MGLTDTAGNP MHLTPHDFRR VFTTTAVQDG LPLHIASRIL GHRHLNSTQP YTAVFQDDLI
RTFRTFVDRR RSARPAEEYR EPTPEEWDEF EEHFALRRVE LGSCARPYGS SCEHEHACIR
CPVLRVDPAQ LDRLEAIAAS LLQRITEAEE RGWPGEVEQL TISLRAAQDK ILATAPPRKG
SVFLGDPAIP PTNAPQA
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