Gene Mjls_5286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5286 
Symbol 
ID4880983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5537092 
End bp5539044 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content66% 
IMG OID640142599 
Productputative DNA integrase/recombinase 
Protein accessionYP_001073540 
Protein GI126437849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCAC AGGTCCAGCT GCTGTCACGG CCCGATTCAC CGCATCTGCA AGCGATCCCA 
GCAGACAGCC GGTTCGGCCC CGCCGGCCTG GTACGCCCGC TGTGGGGGTA TGACGCCAAC
CACGCGCCCC CACCACCGCC AGAGGGCGCC CGCGGTGCGG CGATGCAGCA TCTCACCATC
ACCGAGTTGT GCGACGTCGT AACCAAGCAC CACCGGACGC TGCCACCCCA GCAGCTTCAG
CCGATGATTC GGGGAACGCA TGCCCTGCTG GGTGTCCTGG CTCAATATTC AGGGCAGACG
TGGGAGGAGC GGTGGCTGGC CAGCGGTTAC GACGCCGCTC CGCGCACGTG GTTCGAGCAT
GATGCGTTGC CGCACTACGA ACACTGGTCA CCCACGCTCA AGGCCCTCAA TGCGCTACTG
CGCGTGCGCG CACTGCGGCC GTCTTACAGT TGGCTGTTGG ATTCTAAGCA GCGGGTAGCC
CTCGGCAGGT TCCTCGACAG CAATGGCGGG CCGGACTTGG AACGGTTGCG TACGCTGCCC
GCCTACCGGG ACGCGGTGCC CAAGTACCAG GCCGACGCCG AAAAGGCGTT GGCGCGGGTG
ATGATCCGCA CCGGGAAGAA CATCGGGCAA CTGTGCGGCG ACGATTTGCT GTTCTACGCG
GACGTGGTGC GCACCTCGGG GCGACAGCGC CGCGAACACC TCATCTGGGA GCTGCTGGTC
GCCCTGGGCC CCTTGGCCGA GGAGGCGCCT ACGCTGCGGG CGACGTGGTC GGCGCGAGGC
AACACACGCC AACACAGCGC TGCGACGCTA GTGGATCGGT ACGGCATCCC CGCCTCAGGA
GTGCGCGACC TCCTCGTGGG CTACCTCGAG GAGCTACAGC CCAACATGGA CTACAGCTCG
CTGGAGGGAC TTGCCTACCG CCTGGCCCGA TTGTTCTGGT GGGAGATCCT GCAGATCAAT
CCGGACCAAA AGGACCTGGC GATCTCGGCC GAGGTGGTGA CGGCGTGGCG GGAACGGTTG
GCGATGACCC TCGACGGCCG CCCGCGACGC GAAGTGCACT CGATCCTGTT CGCCATCCGC
GGCATGTACC GCGACCTGGC CGAGTGGTCG CACGACGACC CCGTCCGCTG GGGTGTCTGG
GTCGCGCCGT GCCCAGTACC GCGGGCGCTC AGTCGCGCGG CGGCCAAGCA GAAACGCCGC
CAGAAGGCCT CCATGCAGGA TCGCACCCGC ATGCTTACCC CGCTGCTGCC GGCACTCCTG
GCTGCGGCTA CAGCGCATAA GGACCGCACC GCAACGCTTC TGCAGCGTGC CTTGACCTGC
ACGCACGACC AGGAATTCGT CGTCGACGGC TTCACTTTCC TTCGGCACTG CCCACCTCTG
CGGCGCGACG GCGACGCCCG CGCCCGGATT TGGGCGCACC TGGCACCCGG ACAGCAGCGG
CCGGGATGGA TCCGAGGCAG TGCCGAGCGC ATCGACGTAA CCGCGCTCGA AGAGGAGGGC
TTCTGGGGGT GGGCGCTCGT GGAGACACTG CGTCACACCG GCATTCGCAT CGAGGAACTT
CTTGAACTGA CCCAATTATC GCTGCGGCAC TACACCGCCT CCACAACGGC CACGCTGGTG
CCGTTGCTCC ACATCGTGCC GTCCAAGACC GATTGCGAGC GGCTGATCCC GATGACTCCG
GAACTGGTCG GAGTGCTGTT GGAGGTTTTG CGCCGCGCCA AGGCCGGCAA GGATCACGTG
CCGCTGTCGA TCGCCTACGA CACCAACGAC AAGGTCCACA GCGAACCGTT CCCGCACCTG
TTCGCACGCC CTCTGGGTAC CCGTCACGAA GTGCTGGGAC GGCACTACGT GCGCCAGATT
CTGGTCCACC TCGCCACGAT CGCCGGGCTC ACCGATGCCG GTCGGCCAGT GCACTTCACT
CCGCACGACT TCCGTCGCCT TGTCTCTGCT TAG
 
Protein sequence
MSPQVQLLSR PDSPHLQAIP ADSRFGPAGL VRPLWGYDAN HAPPPPPEGA RGAAMQHLTI 
TELCDVVTKH HRTLPPQQLQ PMIRGTHALL GVLAQYSGQT WEERWLASGY DAAPRTWFEH
DALPHYEHWS PTLKALNALL RVRALRPSYS WLLDSKQRVA LGRFLDSNGG PDLERLRTLP
AYRDAVPKYQ ADAEKALARV MIRTGKNIGQ LCGDDLLFYA DVVRTSGRQR REHLIWELLV
ALGPLAEEAP TLRATWSARG NTRQHSAATL VDRYGIPASG VRDLLVGYLE ELQPNMDYSS
LEGLAYRLAR LFWWEILQIN PDQKDLAISA EVVTAWRERL AMTLDGRPRR EVHSILFAIR
GMYRDLAEWS HDDPVRWGVW VAPCPVPRAL SRAAAKQKRR QKASMQDRTR MLTPLLPALL
AAATAHKDRT ATLLQRALTC THDQEFVVDG FTFLRHCPPL RRDGDARARI WAHLAPGQQR
PGWIRGSAER IDVTALEEEG FWGWALVETL RHTGIRIEEL LELTQLSLRH YTASTTATLV
PLLHIVPSKT DCERLIPMTP ELVGVLLEVL RRAKAGKDHV PLSIAYDTND KVHSEPFPHL
FARPLGTRHE VLGRHYVRQI LVHLATIAGL TDAGRPVHFT PHDFRRLVSA