10 homologs were found in PanDaTox collection
for query gene Sros_2594 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_2594  hypothetical protein  100 
 
 
683 aa  1399    Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.397172 
 
 
-
 
NC_008699  Noca_1778  hypothetical protein  39.83 
 
 
626 aa  396  1e-109  Nocardioides sp. JS614  Bacteria  normal  0.294747  n/a   
 
 
-
 
NC_013739  Cwoe_2283  hypothetical protein  26.97 
 
 
427 aa  69.3  0.0000000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.275033 
 
 
-
 
NC_013739  Cwoe_3553  hypothetical protein  23.08 
 
 
453 aa  65.5  0.000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.56274  normal 
 
 
-
 
NC_013440  Hoch_4658  Cytochrome-c peroxidase  22.96 
 
 
768 aa  59.3  0.0000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264501  normal 
 
 
-
 
NC_013730  Slin_3272  Parallel beta-helix repeat protein  23.53 
 
 
402 aa  53.5  0.00001  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2900  hypothetical protein  22.47 
 
 
880 aa  46.2  0.002  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.000339287  hitchhiker  0.00411804 
 
 
-
 
NC_009092  Shew_2404  hypothetical protein  23.11 
 
 
883 aa  45.1  0.004  Shewanella loihica PV-4  Bacteria  normal  0.647298  normal 
 
 
-
 
NC_007760  Adeh_2620  parallel beta-helix repeat-containing protein  22.77 
 
 
413 aa  44.3  0.007  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1658  hypothetical protein  23.48 
 
 
884 aa  44.3  0.007  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>