11 homologs were found in PanDaTox collection
for query gene Shew_3320 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009092  Shew_3320  FG-GAP repeat-containing protein  100 
 
 		 529 aa  1063    Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_4255  FG-GAP repeat-containing protein  52.2 
 
 		 512 aa  501  1e-141  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.000000954182  hitchhiker  0.000000354896 
 
 
-
 
NC_009831  Ssed_0707  FG-GAP repeat-containing protein  50.59 
 
 		 513 aa  484  1e-135  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.0000109321  hitchhiker  0.0000143754 
 
 
-
 
NC_009901  Spea_3626  FG-GAP repeat-containing protein  48.19 
 
 		 511 aa  469  1.0000000000000001e-131  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_0069  FG-GAP repeat-containing protein  42.09 
 
 		 511 aa  412  1e-114  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_2872  Endonuclease/exonuclease/phosphatase  23.48 
 
 		 621 aa  48.9  0.0002  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007514  Cag_1560  VCBS  26.96 
 
 		 1838 aa  46.2  0.001  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.431864  n/a   
 
 
-
 
NC_006348  BMA0008  FG-GAP/YD repeat-containing protein  29.33 
 
 		 1806 aa  43.5  0.009  Burkholderia mallei ATCC 23344  Bacteria  normal  0.957829  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2855  FG-GAP/YD repeat-containing protein  29.33 
 
 		 1825 aa  43.5  0.009  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A2231  FG-GAP/YD repeat-containing protein  29.33 
 
 		 1825 aa  43.5  0.009  Burkholderia mallei NCTC 10229  Bacteria  normal  0.685998  n/a   
 
 
-
 
NC_009074  BURPS668_0606  Rhs family protein  29.33 
 
 		 2031 aa  43.5  0.009  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
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