| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0707 |
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| Symbol | |
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| ID | 5612072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 852274 |
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| End bp | 853815 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931551 |
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| Product | FG-GAP repeat-containing protein |
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| Protein accession | YP_001472446 |
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| Protein GI | 157373846 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000109321 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000143754 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGAAGTG AGAAAAAAGG ATTTACATAC TTGGCTCTGG CAGGCTTAAC GGCGTTGTTG
GCCTCATCGG GAGCTATCGC TGCCGATAGA GATAAACCTG TCACTGTAGA AGAGCACACC
ATTCAGGCGC CGTTCAATCT TACTCACCCG GTGCTGCCCG TCGATCTCTT GCCCTCTCCC
GGGAAAGAGC TGGTTACCTT CGGCGTGGAT GACAATCTGC AAAAGTGGTT AGGTATCTAC
ACATTAAATA CCGACAATCA ACGTTATAGC CTGTTCCAAA AATTACTACT GCCACCTTCG
TTCTACTCTT TCGATATCAG CGATGAGAGT GATAACGGTC AGGGAAAGCA GGGACTCTAT
TTTCTTTCCA GTGAGCATAT TGTTCAGTAT GTGCCTGAGA ATAGTTTGGC CCCTTTCGAT
GTGATTACAG AGATTAACTC TATTACGCTA AAGAAACGTC CGGATTTCAT CCGTCGCGGC
GAGTTCGTAC GGGATCTTAA CGGCGATAAG CTTGCCGATA TTTTAGTTAG CGATTTTTCA
CAGGTCAGGC TTCTGATAGC GAAGGCTGAG GGAGGGTTTG AAGAGCAGAC CTTGCCGATA
ACTCCACAAG TTAAAGTGAA CAAGCATGGC GCCGAGTATA TCGAATCTAA GCTCTATATC
AGCGATGCCA ATCTGGATGG CCGCGATGAT ATCATTAAGA TTGCCGAAGG TGAGCTGGAG
GTGTACCCGC AAAATGAAAC CGGCATGTTT AACACCCTGG CTAGCTATAT CCCCGTCAGA
CAAGCTATCA GTGGCGTCGA TTGGTGGAAT AAGCGTGATG CTTTTGGTGA GTCGTTAGAT
CAAAGTTCCT TGATATACAG GAAGGTGGAG GAGGTCAGAG ACATCAATAA TGATGGCATT
ACCGATCTTG TACTTAGATA CACCAAGAGC TCCGGAGTAC TGGATAGAGT CAATGATTAT
GAGATCTTTC TCGGTGAAAG CTTGAAGGGT AAGCTGGCCT TTCCGGCCAA GGCTAACAGT
GTTGTGCATG CCGAGGGGAC ATTAACTGGG CTGGAATTTA TCGATATCGA TAATGATGAC
AAGCTTGAGG TGATGGTCGC GGGGTTCGAT ATCGGGTTAT CACAGATCAT AGGTGCGCTG
GTATCGGGCA GTATCGATCA GGATGTCTAT CTGTTTAAGA TGGATAATGA CACTCTTTTC
CCGGCTAAGC CCAATGTATC CAAAGAGGTT GAGCTTAGCT TTAGCCTCAC ATCGGGTCAG
AGTGGTAGCC CGGTGGTTGA GCTTGCCGAT ATCAACGGGG ATAAGTTGCA GGATCTCCTG
CTCTCGGATG GTTCAGACAA GTTAAAAATA TACCTGGGCG ATCCCGGCGG CAAGCTGATT
AAGGGTCGCA GTGAGCAAGT AATTACGCTA TTACCACAAG AGGGCGATAT GTTGTCCAGT
GACGACCTTA ATGGTGATGG CAAAGATGAC ATCTTAATTA AGTACGGGCG TCAGGATGAC
AAGAAACTGT TAAGCCAATT TAAGGTACTT ATTTCCGGTT AA
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| Protein sequence | MGSEKKGFTY LALAGLTALL ASSGAIAADR DKPVTVEEHT IQAPFNLTHP VLPVDLLPSP
GKELVTFGVD DNLQKWLGIY TLNTDNQRYS LFQKLLLPPS FYSFDISDES DNGQGKQGLY
FLSSEHIVQY VPENSLAPFD VITEINSITL KKRPDFIRRG EFVRDLNGDK LADILVSDFS
QVRLLIAKAE GGFEEQTLPI TPQVKVNKHG AEYIESKLYI SDANLDGRDD IIKIAEGELE
VYPQNETGMF NTLASYIPVR QAISGVDWWN KRDAFGESLD QSSLIYRKVE EVRDINNDGI
TDLVLRYTKS SGVLDRVNDY EIFLGESLKG KLAFPAKANS VVHAEGTLTG LEFIDIDNDD
KLEVMVAGFD IGLSQIIGAL VSGSIDQDVY LFKMDNDTLF PAKPNVSKEV ELSFSLTSGQ
SGSPVVELAD INGDKLQDLL LSDGSDKLKI YLGDPGGKLI KGRSEQVITL LPQEGDMLSS
DDLNGDGKDD ILIKYGRQDD KKLLSQFKVL ISG
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