| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3320 |
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| Symbol | |
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| ID | 4924030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3959396 |
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| End bp | 3960985 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164932 |
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| Product | FG-GAP repeat-containing protein |
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| Protein accession | YP_001095445 |
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| Protein GI | 127514248 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATAC CGGCAATTCG TGCCCTCGCC CCCTGTCTCA CCGCCAGCCT GACTCTGCTC
TGCTCCATGC AGGTCTTCGC CGATAAGGCG CCGTTGGCCT TCGTCTCTCA AACCATAGAT
ACCGGATTTA AGCTCACCCA TCCGCTGGAG AGCCTCAACC TGGTCGGCGA TGCTAACAAG
GAGCTGCTGG CAATCGGTGT CGATGATCGC CAGACCAAAT GGCTCGCCGT CTATGGCTTA
GATGGCGAAA GCAGCCAGTA TCGGCTGCTG CATAAGATGC CTCTGCCTGG CGATCTCTAT
CGATACGACA TGAGTGCTAA GCCAAAGCAG GCCATGCTAA AGCAGAGCAG TTTACAGCAA
GGCAATTTAA AGCAGGGCAA GCCACAGCAG GCCGATTCAC TTCAGTCTGT CTACTTCATG
TCGCGCGCTC ATCTCTCTGT GTTGACGGTC GGCGACCAAG GGCTGGCACT TCGCGAGCTG
CTCAATGTGG CGCCGCTGGT GGTGAAGCCG CGCATCGAGT TCATCGCCCG CGGCGAGTTT
GTGCGTGATC TCAACGGCGA TGGCCGTGAT GATTTTATCG TGGGCCAGTT TGAGCAGACC
CAGCTCTTCC TCAGTCAGAA CGATAGCTGG CAGGCGCAGA CCCTGGCGAT ACAGCCCAAG
GTGCTGCTCT ATCGCGATGG CGCCCGCTAC AGCGAGACCA AGCTTTATTT TGCCGACATG
GATTTCGATG GTCACGACGA CATCATCAAG GTGGGCGAGG GGGAGCTTGA GATCTATCCC
CAGCATCAGG ATGGCAAGTT CGAGAGCTAC CCCAGATTCC AGCCCGTGAG TCAGGCGATC
AGTGGCCTGG ACTGGTGGGA CAGACGCGAT GCCTATGGCG AGGCGCTGGA TCAGAGCGAT
CTCGTCTATC GTAAGGTCGA GGCTCTGCAG GATATCGATG GCGACGGCCT TGTGGACATG
GTGGTGCGCT ACACCAAGAG CTCTGGGGTG CTGGATAGGG TCAACGATTA TGAGATCTAT
CTGGGGGTGA AGGGCGACAA GGGAGTGAGC TTTGGCAAGC AGCCCCAGAG CGTGATCCGC
GGCGATGGCA CCCTGACGGG CTTCGAGCTG GTGGATATCG ACCTAGATGG TCGCAGCGAG
GTGCTGGTCT CTGGGTTCGA TATTGGCCTG TCGCAGATCA TCGGCGCCCT GGTGTCGGGC
AGTATCGATC AGGACGTGCA CCTGTTTACC ATGGACGATA AGCGGCGTTT CGCCGCCAAG
CCAAACATGA GCAAGTCGGT GGAGCTGAGT TTCAGCCTGA CCTCGGGCCA GAGCGGTGCG
CCCGTGGTAA AGCTGGCGGA TATCGATGGC GACAAGCGTC AGGATCTGCT GCTTTCAGAC
GGCGACACAG AGCTGGATCT GTTTCTGGGT AGTGCCAAGG GCGCGCCCTT CGATCGCAAA
GAAAGCCTCA AGCTCACCCT GCCTATCGAT GGCGACATGC TCAGCAGCGA AGATCTTAAT
TTAGACGGTA AGGCGGATCT GCTTATCAAG TATGGCAGGC AGGATAAGGC CGAGCTGCAG
AGCCAGTTTT TGGTGATCAT GACCCAATAG
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| Protein sequence | MKIPAIRALA PCLTASLTLL CSMQVFADKA PLAFVSQTID TGFKLTHPLE SLNLVGDANK
ELLAIGVDDR QTKWLAVYGL DGESSQYRLL HKMPLPGDLY RYDMSAKPKQ AMLKQSSLQQ
GNLKQGKPQQ ADSLQSVYFM SRAHLSVLTV GDQGLALREL LNVAPLVVKP RIEFIARGEF
VRDLNGDGRD DFIVGQFEQT QLFLSQNDSW QAQTLAIQPK VLLYRDGARY SETKLYFADM
DFDGHDDIIK VGEGELEIYP QHQDGKFESY PRFQPVSQAI SGLDWWDRRD AYGEALDQSD
LVYRKVEALQ DIDGDGLVDM VVRYTKSSGV LDRVNDYEIY LGVKGDKGVS FGKQPQSVIR
GDGTLTGFEL VDIDLDGRSE VLVSGFDIGL SQIIGALVSG SIDQDVHLFT MDDKRRFAAK
PNMSKSVELS FSLTSGQSGA PVVKLADIDG DKRQDLLLSD GDTELDLFLG SAKGAPFDRK
ESLKLTLPID GDMLSSEDLN LDGKADLLIK YGRQDKAELQ SQFLVIMTQ
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