16 homologs were found in PanDaTox collection
for query gene Shew_0431 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009092  Shew_0431  hypothetical protein  100 
 
 
136 aa  265  2e-70  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0509  hypothetical protein  53.28 
 
 
126 aa  136  7.999999999999999e-32  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000700122  n/a   
 
 
-
 
NC_009997  Sbal195_3941  hypothetical protein  53.28 
 
 
126 aa  136  7.999999999999999e-32  Shewanella baltica OS195  Bacteria  normal  0.380145  normal 
 
 
-
 
NC_011663  Sbal223_3759  hypothetical protein  53.28 
 
 
126 aa  136  7.999999999999999e-32  Shewanella baltica OS223  Bacteria  normal  normal  0.583601 
 
 
-
 
NC_009665  Shew185_3815  hypothetical protein  53.28 
 
 
126 aa  135  2e-31  Shewanella baltica OS185  Bacteria  hitchhiker  0.00633545  n/a   
 
 
-
 
NC_010506  Swoo_4351  hypothetical protein  52.42 
 
 
133 aa  135  3.0000000000000003e-31  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0602  hypothetical protein  54.03 
 
 
130 aa  134  5e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3323  hypothetical protein  56.41 
 
 
154 aa  134  6.0000000000000005e-31  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0549  hypothetical protein  53.17 
 
 
154 aa  131  1.9999999999999998e-30  Shewanella sp. ANA-3  Bacteria  normal  0.470916  normal 
 
 
-
 
NC_004347  SO_0550  hypothetical protein  52.38 
 
 
139 aa  130  5e-30  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0550  hypothetical protein  53.85 
 
 
127 aa  126  1.0000000000000001e-28  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3480  hypothetical protein  53.85 
 
 
127 aa  126  1.0000000000000001e-28  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3729  hypothetical protein  50.38 
 
 
131 aa  117  4.9999999999999996e-26  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3530  hypothetical protein  47.86 
 
 
135 aa  107  4.0000000000000004e-23  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0660  hypothetical protein  51.3 
 
 
140 aa  100  5e-21  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3156  hypothetical protein  45.08 
 
 
136 aa  94.7  4e-19  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
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