Gene Shewana3_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0549 
Symbol 
ID4476510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp644091 
End bp644555 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content45% 
IMG OID639725081 
Producthypothetical protein 
Protein accessionYP_868194 
Protein GI117919002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.470916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAATAC GGTTATGCTG GACTCAGTTC GGGGCTTTTC CTACACTTGC TCCACTTAAA 
ATAACCAATA AACCCAAGTC AATGCCTAAA CGCCTTATTC TACTGATTGC CCTCTACACC
CTCTTTGCCG TAGTCGCGCT ACTGCGTGCC GTTACCACAG GTTCGTTCGA TCTCTTTAGC
TTAGGCGTTT TGCCAGTTTT GTTTGGCATA CTCACTCAGG CGCCTTGGTC TAGCTTAGTG
CTGAAAATTT ATATTGGATT ACAAACCTTA GGCCTGTCGG CATTGGGGAT TACTGCGATT
ATCGCCTATC AAATTACCCC GCAGGACGTA AAAGTGGTGG TTGAAGGCCA CAACATCCCT
ATGTTGCCCT TAGTCTTAAG CATCATTGCC TTGTTATCTG TGCAGTATTG GATAGCCTTT
TCCCGCGTCA GCCATAATTA TTTAACCGCA AAGGTAAAAG CATAA
 
Protein sequence
MIIRLCWTQF GAFPTLAPLK ITNKPKSMPK RLILLIALYT LFAVVALLRA VTTGSFDLFS 
LGVLPVLFGI LTQAPWSSLV LKIYIGLQTL GLSALGITAI IAYQITPQDV KVVVEGHNIP
MLPLVLSIIA LLSVQYWIAF SRVSHNYLTA KVKA