| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0602 |
|---|
| Symbol | |
|---|
| ID | 5609900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | - |
|---|
| Start bp | 732625 |
|---|
| End bp | 733017 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640931447 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001472342 |
|---|
| Protein GI | 157373742 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC CAACTATGGC ACTCTCCATC ATCATGTTGC TTTACGCCCT GCTTGCCATA
GTCGCTACTT GGCGAGCCGT GAGCATTCAA GCCATAGATC TGTTTTCATT AGGCGTGATC
CCCGTGCTCT TTGGCTTGGC AATGAGAACC AGTTGGGCAG GCATCGCATT TAAAGTCTAT
CTTTTCATTC AGACATTAGG CTTGGCAGCA CTTGCCGGGA CCGCCATCAT CGCTTATCAG
ATAACACCTG ACGATGTGAA AGTTGTGCTC AATAACCAAG AGATCCCGGT ACCATTAATC
GCCGTCTCTG GTCTGCTCCT ATTGGCCTTT CAGTTTTGGG TCGCCTTTTC TAAAACGACA
AAAGCCTATC TGGTCCGTAA CACTGCAGAA TAA
|
|---|
| Protein sequence | MKKPTMALSI IMLLYALLAI VATWRAVSIQ AIDLFSLGVI PVLFGLAMRT SWAGIAFKVY
LFIQTLGLAA LAGTAIIAYQ ITPDDVKVVL NNQEIPVPLI AVSGLLLLAF QFWVAFSKTT
KAYLVRNTAE
|
|---|
| |