Gene Shew_0431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0431 
Symbol 
ID4921556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp483467 
End bp483877 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content59% 
IMG OID640161960 
Producthypothetical protein 
Protein accessionYP_001092562 
Protein GI127511365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAC CAAGTCCCAG CATACTGCTA CTGATCGCCC TCTATATTGT TATCGCCATC 
CTCGCCGGTT GGCGCGCCCT GGACAGCCAG ACCTTAGATC TCTTTACCCT GGGCGTGATC
CCTGTGCTCA TCGGCCTCAT CGCCCGCACC AGCTGGGCAA GCCTAGTGCT GAAGATCTAT
ATCGGCATAC AAACCCTGGG CTTCACGGCG CTGGGCGCCA CGGCGGTGAT CGCCTATCAG
ATCACCCCGG AGGACGTTAA GGTAGTGGTG CGTGGTCAGG AGCTGCCCAT CTGGGCCATC
GCCCTAGTCG TCACCGCACT GCTGAGTTTC CAGTGGTATA TGGCCTTCTC CAAGGGACTG
AAACAGTACC TGCCGCAGGC GGCTCAAACC AGCGACCAGA CCAAGGCTTA A
 
Protein sequence
MNRPSPSILL LIALYIVIAI LAGWRALDSQ TLDLFTLGVI PVLIGLIART SWASLVLKIY 
IGIQTLGFTA LGATAVIAYQ ITPEDVKVVV RGQELPIWAI ALVVTALLSF QWYMAFSKGL
KQYLPQAAQT SDQTKA