| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3530 |
|---|
| Symbol | |
|---|
| ID | 4280423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 4200524 |
|---|
| End bp | 4200931 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638136342 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_752196 |
|---|
| Protein GI | 114564682 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAATA TGAACCAAAA TGCAGCCCCC CGAATACCAA TTAGAGTCAT GCTTCTTATC
TCACTGTATG TTGTACTCAC TCTTATTGCT ATTTGGCGCG CGACAACTTA TCAAGCATAT
GATTTATTAA CACTGGGAGT AATACCGGTT TTCATTGGCT TAATCAAACG TGCGGCATGG
ACAAAAGTAC TGTTGATAAG TTATGTAGGC TTACAAAGCC TCGGACTTGC AGCGATGACT
ACAACAGCAG TGATTGCTTA TCAAATCACC CCTGATGACG TAAAACTGGT GTTTCAAGGT
TATAACATTC CACTGATCCC ACTGTGGTTG TTACTGTTGA GCGTGGTGGT ATTTCAATGG
TGGGTTGGAC TCTCTAACGT GACTAGAAAC TATCTCGTTA AAAAGTAA
|
|---|
| Protein sequence | MINMNQNAAP RIPIRVMLLI SLYVVLTLIA IWRATTYQAY DLLTLGVIPV FIGLIKRAAW
TKVLLISYVG LQSLGLAAMT TTAVIAYQIT PDDVKLVFQG YNIPLIPLWL LLLSVVVFQW
WVGLSNVTRN YLVKK
|
|---|
| |