10 homologs were found in PanDaTox collection
for query gene Sden_0006 on replicon NC_007954
Organism: Shewanella denitrificans OS217



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007954  Sden_0006  hypothetical protein  100 
 
 
237 aa  481  1e-135  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0006  hypothetical protein  49.51 
 
 
270 aa  214  7e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000157652 
 
 
-
 
NC_007912  Sde_1589  hypothetical protein  45.07 
 
 
267 aa  117  1.9999999999999998e-25  Saccharophagus degradans 2-40  Bacteria  normal  0.134465  normal 
 
 
-
 
NC_013440  Hoch_3800  hypothetical protein  39.64 
 
 
354 aa  84.7  0.000000000000001  Haliangium ochraceum DSM 14365  Bacteria  hitchhiker  0.00611211  normal  0.136347 
 
 
-
 
NC_007410  Ava_B0146  hypothetical protein  28.89 
 
 
300 aa  79.7  0.00000000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03107  hypothetical protein  32.14 
 
 
269 aa  75.1  0.0000000000009  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0635239  n/a   
 
 
-
 
NC_010002  Daci_2893  hypothetical protein  29.37 
 
 
342 aa  59.3  0.00000005  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.213192 
 
 
-
 
NC_008255  CHU_2274  hypothetical protein  38.33 
 
 
274 aa  45.1  0.001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1601  hypothetical protein  32.14 
 
 
247 aa  42.7  0.005  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.253838 
 
 
-
 
NC_010524  Lcho_1860  hypothetical protein  31.03 
 
 
546 aa  42.4  0.007  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
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