Gene Swoo_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0006 
Symbol 
ID6114223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp8277 
End bp9089 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content43% 
IMG OID641631481 
Producthypothetical protein 
Protein accessionYP_001758402 
Protein GI170724376 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000157652 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAGTGG TGAGTAACAG TAGGGTTGGA AGTATATTTG AGCGTATAAA AAAGTTATCA 
ATAGTCTTAA TTGTAGTCAT ACTCTCTTGC GGGTGTAGCC CTAAACCTAT GACACTGCCC
ATTAAACTTA TGTGGGGGGA GCAGGAATTA AACTGCAATC AAGCTCTACC AGAGCTACCA
CAATGGCGGC TAGAAAATAT TCAGTTCTAC CTGAGTCAAT TCAAAAATAA CGGTAGACCA
ATCTACCTTG TACAAGATGG CCACCTCACA CAACAGAAAA ACCTAGCACT TCTAGGCAGT
GATTGTCGCT CTGATGGCCA GTGGCAAATC GTATTTGAAC ACACGCTAGA ACCAGGAGAG
TTCAGTTTTA ATCTAGGTGT TCCCTTTAAG CAGAACCATC AAGCTCCGCT CAAAAGCCAA
TCCCCGCTGA ATCAAAGCGA TATGTTTTGG ACTTGGCAGA TGGGACATAA ATTTTTCAGA
CTTGATCTCA CCAAACATGA ATCAAAAAAG AGGGAAACAG AACCCCAAAC AGGTTGGCAA
TTTCACTTAG GTTCAACAGG TTGTAAGTCT GCCAGTGTAA TGAGAGCACC AACGAAGGAG
TGCGATCACC CCAACAGACC AAAGTTCACT TTAACCTATC AAGGTGACAA CAGCTTAGTG
CTCGATCTCG CCCCCCTATT ATCTGAAACT CTAAATAACC AAAAGATCAC GCAAGACTCA
TGCATGTCAG ACCCGCACAC ACTTATCTGC AGAGAGCTAT TACCTAGAAT AGGCATAAAT
AGCAGCTCTG AAATCTGGCG TTGGCAGTCA TGA
 
Protein sequence
MRVVSNSRVG SIFERIKKLS IVLIVVILSC GCSPKPMTLP IKLMWGEQEL NCNQALPELP 
QWRLENIQFY LSQFKNNGRP IYLVQDGHLT QQKNLALLGS DCRSDGQWQI VFEHTLEPGE
FSFNLGVPFK QNHQAPLKSQ SPLNQSDMFW TWQMGHKFFR LDLTKHESKK RETEPQTGWQ
FHLGSTGCKS ASVMRAPTKE CDHPNRPKFT LTYQGDNSLV LDLAPLLSET LNNQKITQDS
CMSDPHTLIC RELLPRIGIN SSSEIWRWQS