Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0006 |
Symbol | |
ID | 6114223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 8277 |
End bp | 9089 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641631481 |
Product | hypothetical protein |
Protein accession | YP_001758402 |
Protein GI | 170724376 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000157652 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGAGTGG TGAGTAACAG TAGGGTTGGA AGTATATTTG AGCGTATAAA AAAGTTATCA ATAGTCTTAA TTGTAGTCAT ACTCTCTTGC GGGTGTAGCC CTAAACCTAT GACACTGCCC ATTAAACTTA TGTGGGGGGA GCAGGAATTA AACTGCAATC AAGCTCTACC AGAGCTACCA CAATGGCGGC TAGAAAATAT TCAGTTCTAC CTGAGTCAAT TCAAAAATAA CGGTAGACCA ATCTACCTTG TACAAGATGG CCACCTCACA CAACAGAAAA ACCTAGCACT TCTAGGCAGT GATTGTCGCT CTGATGGCCA GTGGCAAATC GTATTTGAAC ACACGCTAGA ACCAGGAGAG TTCAGTTTTA ATCTAGGTGT TCCCTTTAAG CAGAACCATC AAGCTCCGCT CAAAAGCCAA TCCCCGCTGA ATCAAAGCGA TATGTTTTGG ACTTGGCAGA TGGGACATAA ATTTTTCAGA CTTGATCTCA CCAAACATGA ATCAAAAAAG AGGGAAACAG AACCCCAAAC AGGTTGGCAA TTTCACTTAG GTTCAACAGG TTGTAAGTCT GCCAGTGTAA TGAGAGCACC AACGAAGGAG TGCGATCACC CCAACAGACC AAAGTTCACT TTAACCTATC AAGGTGACAA CAGCTTAGTG CTCGATCTCG CCCCCCTATT ATCTGAAACT CTAAATAACC AAAAGATCAC GCAAGACTCA TGCATGTCAG ACCCGCACAC ACTTATCTGC AGAGAGCTAT TACCTAGAAT AGGCATAAAT AGCAGCTCTG AAATCTGGCG TTGGCAGTCA TGA
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Protein sequence | MRVVSNSRVG SIFERIKKLS IVLIVVILSC GCSPKPMTLP IKLMWGEQEL NCNQALPELP QWRLENIQFY LSQFKNNGRP IYLVQDGHLT QQKNLALLGS DCRSDGQWQI VFEHTLEPGE FSFNLGVPFK QNHQAPLKSQ SPLNQSDMFW TWQMGHKFFR LDLTKHESKK RETEPQTGWQ FHLGSTGCKS ASVMRAPTKE CDHPNRPKFT LTYQGDNSLV LDLAPLLSET LNNQKITQDS CMSDPHTLIC RELLPRIGIN SSSEIWRWQS
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