| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1860 |
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| Symbol | |
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| ID | 6163337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2011141 |
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| End bp | 2012781 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664622 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790892 |
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| Protein GI | 171058543 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTGCG TCCATCCGAA CCCGAATCCG AGCCTCTCCA TGAACCGAAT CCTGCGCACC
CGTCCCGCCA CCGCTGCCCT GCGCGGCACC CTGGCACTCT CCACCCTCGC CGCCATCGGC
GCCCTGAGCG CCTGCGGCGG CGGCAGCGAT GCGGCACCGT CCGGCACGAC CAGCACGGTC
AGCGGTACCG CCGCGGTCGG CGCCCCGATC GTGGGCGGCA CCGTCACCGC CAAGTGCGCC
GCCGGCACCT CGAGCACCGC CACCACCGGC ACCGACGGCC GCTTCGACCT GACCCTGACC
AACGCCACCC AGCCCTGCCT GCTGGAAGTC TCCGGCGGCA CCGTCAACGG CCGCACCAAC
ACCGACCGCT TCCACAGCGC TTCGCTGGCC GCCGGCACGG TGAACGTCAC CAACCTCACC
GAGCTGATGG TCGCGCACGC CCTGCAGGCC ACGGCTTCGG CCACGACCAC CACGCAGTAC
GCCGGCGCCC TGCCGACCGC GCGCCTGACC GGCACCACGC TGTCGGCCAG CAAGGCCTAC
GTGCTCGCGC TGCTGCCGCA ACTGGGCGCG GCCACGCCCG CCAGTGGCGT GGACATCGTG
ACCTCGGCCT TCGCGGCCGA CGGAACCGGC CTGGACGCCG TGCTGGACGA TCTGGCCGCG
GCGCTGCGCG GCAAGACGCT GGCCGCCGTC GGCACCGCCA TCGGCACGGA CGCGGCATCG
ACCACCGCGC CCGGCAACCC GGCTGCCGCG CTGACCACCG TCGCCCAGAA GGTGCTCAAG
GTCAAGTTCG CGGCGGTCGC CGGCAGCGGC AACACCCCCG TGTCGTGTGG CAGCCAGGTG
ATCGGCGGAC TGGGCACCAG CAGCGCCTCG GCCAAGCTGC AGGATCTGCG CTTCTACCTG
TCGGGCGCCC AGCTGCTGGA CGCGGGCGGC AACGTCGTCA GCACGACCAT CAAGCTGCCG
CTGAACACGC AGTGGAACTA CACCTCGCCG CTGAACGCGA ACGACTGGAC CACGCTGATC
GACCTGGAAA ACGGCACCGG CGCCTGTGCC TCGGCCGCCG ACGGCACCAC CACCGCGGCG
ATGAACGACA CGCTGCGCCT GGTGATTCCG AGCGGCGTCA GCTTCAGCGG CATCCAGCTG
GTGATGGGCC TGCCCGATTC GCTGAACAAG ACCTCGGCCA CCGCACCCGC GCCGCTGGAC
GCCGCCGCGC TGGCCTGGGG CTGGGCGGGC GGCGCCTACA AGTTCGCCAA GATCGAACTG
GTCGACGCCA ACAAGGGCAC CGCCACCGCC TGGCCGGCAC CGGCGACCGG CACCTATGAC
GCCTTCTACT TCCACCTCGG CGCCACCGGC TGCACGGCCG ATCCGATCAG CGGCATCAAC
ACCTGCACCC GCCCGAACCG GATGGCAATC TCGCTGGCGA GCTTCAACCC CGCGACCCAG
CAGGTGGCGG TGGACCTGGC AGCCCTGGTC GCCAGCAACG ACATCCAGGT GAACCTGGGC
GGAGCCCCCG GCTGCATGTC GGGCGCGACC GACGGCGAGT GCATCGCGCA GTTCCCGAAC
GCCCTCGGCC TGGACGTGAG CACCGGCCGG CCGATCGCCG GCGGCGCCGC GCAGACCGTG
TTCCGCGCGA TCAGCCGATA A
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| Protein sequence | MACVHPNPNP SLSMNRILRT RPATAALRGT LALSTLAAIG ALSACGGGSD AAPSGTTSTV
SGTAAVGAPI VGGTVTAKCA AGTSSTATTG TDGRFDLTLT NATQPCLLEV SGGTVNGRTN
TDRFHSASLA AGTVNVTNLT ELMVAHALQA TASATTTTQY AGALPTARLT GTTLSASKAY
VLALLPQLGA ATPASGVDIV TSAFAADGTG LDAVLDDLAA ALRGKTLAAV GTAIGTDAAS
TTAPGNPAAA LTTVAQKVLK VKFAAVAGSG NTPVSCGSQV IGGLGTSSAS AKLQDLRFYL
SGAQLLDAGG NVVSTTIKLP LNTQWNYTSP LNANDWTTLI DLENGTGACA SAADGTTTAA
MNDTLRLVIP SGVSFSGIQL VMGLPDSLNK TSATAPAPLD AAALAWGWAG GAYKFAKIEL
VDANKGTATA WPAPATGTYD AFYFHLGATG CTADPISGIN TCTRPNRMAI SLASFNPATQ
QVAVDLAALV ASNDIQVNLG GAPGCMSGAT DGECIAQFPN ALGLDVSTGR PIAGGAAQTV
FRAISR
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