Gene Sde_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1589 
Symbol 
ID3965656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2043467 
End bp2044270 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content47% 
IMG OID637920670 
Producthypothetical protein 
Protein accessionYP_527063 
Protein GI90021236 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.134465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGTTC TCGATAAAAA GCAAGCTGCC TATGTAGGCG TATTGTTAAT GGTGCTATTA 
ATGGCTGCTT GTGGGCGTAA GCCTATGCTA GAAGTGGCTT TTGCATTACC GGAAGCGGCA
GAGCACCAGC GTGTTGAATT TCTCGCTTTT TATATATCTA GCCCGTATTT TATTTTGAAA
GATGGGCAAA AATTACCTGC CGTGTTGGAT GATACTAAGC CGTGGCAATC TAATACCGTG
GCGCTAATAA AATTGCATTG CCTTAGTGAA AATTGCGGTA GGCAATTAGT GTTAAAGCCG
CCACGCACTA AAGCACACAA CATTCAAGGG GTTGGGTTCG ATATGGGGGT ACCCTTCGAG
CAAAATCACA GTAATCCGTT ATTGGCGCCA GCACCTTTAA ACGACGACGC AATGTTTTGG
GTGTGGCAGC AGGGGCATAA ATTTTTGCGT TTGGATTTAT CTAGTACGGC GAGTCAAGGC
GGCGTTGTTT TTCATATTGG TAGCGTGGGC TGCGCGGCAA GCTCTGTAAT GCGAGCTCCT
TCTTCTGCGT GTACTCAACC AAATATTTTA GCGCTGGAAT TTCCTGTGTT CGATGTGAAC
GAAAATAAGT TGGAATTTCA ATTGGCCTCT TTTGGTGCAC CCGCGGGTAA CGAAGTGTTG
CATTGCACGG GGGATTACGC TGCTAAACTC GACTGTGCCG CGTTGTTTGG TCAACTGGGG
ATGAGTTTGA GCGAGGGGCG ATGCGACCGC GTGTGTAATG CGGGCTATTT ATTTTCGGTT
GTGCAGCGTG GCATTAATGA TTAA
 
Protein sequence
MCVLDKKQAA YVGVLLMVLL MAACGRKPML EVAFALPEAA EHQRVEFLAF YISSPYFILK 
DGQKLPAVLD DTKPWQSNTV ALIKLHCLSE NCGRQLVLKP PRTKAHNIQG VGFDMGVPFE
QNHSNPLLAP APLNDDAMFW VWQQGHKFLR LDLSSTASQG GVVFHIGSVG CAASSVMRAP
SSACTQPNIL ALEFPVFDVN ENKLEFQLAS FGAPAGNEVL HCTGDYAAKL DCAALFGQLG
MSLSEGRCDR VCNAGYLFSV VQRGIND