21 homologs were found in PanDaTox collection
for query gene Sbal195_0776 on replicon NC_009997
Organism: Shewanella baltica OS195



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009997  Sbal195_0776  XRE family transcriptional regulator  100 
 
 
72 aa  152  1e-36  Shewanella baltica OS195  Bacteria  normal  0.62299  hitchhiker  0.00396946 
 
 
-
 
NC_009665  Shew185_0746  XRE family transcriptional regulator  98.61 
 
 
72 aa  151  4e-36  Shewanella baltica OS185  Bacteria  normal  0.205768  n/a   
 
 
-
 
NC_009052  Sbal_3609  XRE family transcriptional regulator  97.22 
 
 
72 aa  149  1e-35  Shewanella baltica OS155  Bacteria  hitchhiker  0.000857822  n/a   
 
 
-
 
NC_007954  Sden_3260  transciptional regulator  75 
 
 
76 aa  115  1.9999999999999998e-25  Shewanella denitrificans OS217  Bacteria  decreased coverage  0.00055774  n/a   
 
 
-
 
NC_011663  Sbal223_0773  transcriptional regulator, XRE family  70.83 
 
 
72 aa  110  6e-24  Shewanella baltica OS223  Bacteria  hitchhiker  0.00619674  normal  0.231012 
 
 
-
 
NC_009997  Sbal195_3486  XRE family transcriptional regulator  60 
 
 
71 aa  96.3  1e-19  Shewanella baltica OS195  Bacteria  normal  0.106619  unclonable  0.00000623032 
 
 
-
 
NC_009665  Shew185_1862  XRE family transcriptional regulator  60 
 
 
71 aa  96.3  1e-19  Shewanella baltica OS185  Bacteria  hitchhiker  0.000787798  n/a   
 
 
-
 
NC_009665  Shew185_1974  XRE family transcriptional regulator  60 
 
 
71 aa  96.3  1e-19  Shewanella baltica OS185  Bacteria  normal  0.030681  n/a   
 
 
-
 
NC_009665  Shew185_2554  XRE family transcriptional regulator  60 
 
 
71 aa  96.3  1e-19  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3253  XRE family transcriptional regulator  60 
 
 
71 aa  96.3  1e-19  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3362  XRE family transcriptional regulator  60 
 
 
71 aa  96.3  1e-19  Shewanella baltica OS185  Bacteria  normal  0.826369  n/a   
 
 
-
 
NC_009997  Sbal195_3390  XRE family transcriptional regulator  60 
 
 
71 aa  96.3  1e-19  Shewanella baltica OS195  Bacteria  normal  hitchhiker  0.00303754 
 
 
-
 
NC_009997  Sbal195_1979  XRE family transcriptional regulator  60 
 
 
71 aa  96.3  1e-19  Shewanella baltica OS195  Bacteria  decreased coverage  0.000012505  normal  0.0449192 
 
 
-
 
NC_009997  Sbal195_2029  XRE family transcriptional regulator  60 
 
 
71 aa  96.3  1e-19  Shewanella baltica OS195  Bacteria  decreased coverage  0.0082126  normal  0.318531 
 
 
-
 
NC_008345  Sfri_1656  transcriptional regulator, XRE family protein  50 
 
 
72 aa  71.2  0.000000000004  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.022858  n/a   
 
 
-
 
NC_009784  VIBHAR_06322  hypothetical protein  38 
 
 
115 aa  45.1  0.0003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_1621  transcriptional regulator, XRE family  33.9 
 
 
368 aa  42.4  0.002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0008  XRE family transcriptional regulator  33.9 
 
 
107 aa  42  0.003  Lactococcus lactis subsp. cremoris SK11  Bacteria  hitchhiker  0.000363546  n/a   
 
 
-
 
NC_010087  Bmul_5658  XRE family transcriptional regulator  54.84 
 
 
95 aa  40.8  0.006  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008532  STER_0918  XRE family transcriptional regulator  38.24 
 
 
229 aa  40.4  0.008  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0000791351  n/a   
 
 
-
 
NC_013223  Dret_1776  transcriptional regulator, XRE family  36.54 
 
 
79 aa  40  0.01  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0912116  normal 
 
 
-
 
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