| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3260 |
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| Symbol | |
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| ID | 4019789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3893204 |
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| End bp | 3893434 |
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| Gene Length | 231 bp |
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| Protein Length | 76 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637957313 |
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| Product | transciptional regulator |
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| Protein accession | YP_564259 |
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| Protein GI | 91794608 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00055774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGTTAA TTATGGGTAA TCGAGCTGCA ATAATTTTAA AGACGGGCCG AGCGATTAAG
GGGTTTTCTC AGGATGAGGT GGCGGCGGTT TATGGGGTGA GTCGGCGCAC TTATCAACGG
TGGGAAAATG GGGATTGTAA CGTGCCATCA AATCATCTGC TGTCGATTTT GGATGATGTG
TTTCATTTAT CGATTGATCA GATTGCGGAG GTGACTGATG AGGTTATGTG A
|
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| Protein sequence | MELIMGNRAA IILKTGRAIK GFSQDEVAAV YGVSRRTYQR WENGDCNVPS NHLLSILDDV
FHLSIDQIAE VTDEVM
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