20 homologs were found in PanDaTox collection
for query gene Rpic_3450 on replicon NC_010682
Organism: Ralstonia pickettii 12J



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010682  Rpic_3450  type I restriction system endonuclease  100 
 
 		 224 aa  454  1e-127  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_3053  HsdR family type I site-specific deoxyribonuclease  74.11 
 
 		 1038 aa  361  4e-99  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_1956  type I site-specific deoxyribonuclease, HsdR family protein  74.32 
 
 		 1037 aa  350  1e-95  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.160894  n/a   
 
 
-
 
NC_009052  Sbal_0775  HsdR family type I site-specific deoxyribonuclease  73.66 
 
 		 1041 aa  350  1e-95  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_3473  type I site-specific deoxyribonuclease, HsdR family  73.87 
 
 		 1037 aa  348  4e-95  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_4396  HsdR family type I site-specific deoxyribonuclease  71.62 
 
 		 1038 aa  340  8e-93  Flavobacterium johnsoniae UW101  Bacteria  normal  0.806316  n/a   
 
 
-
 
NC_009802  CCC13826_1410  type I restriction enzyme EcoR124II R protein (R.EcoR124II)  59.73 
 
 		 1031 aa  257  9e-68  Campylobacter concisus 13826  Bacteria  normal  0.643236  n/a   
 
 
-
 
NC_013174  Jden_1501  type I site-specific deoxyribonuclease, HsdR family  31.84 
 
 		 1034 aa  97.8  1e-19  Jonesia denitrificans DSM 20603  Bacteria  normal  0.573056  normal  0.735582 
 
 
-
 
NC_010513  Xfasm12_2271  type I restriction-modification system endonuclease  36.32 
 
 		 1009 aa  97.4  2e-19  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_010577  XfasM23_2179  HsdR family type I site-specific deoxyribonuclease  36.32 
 
 		 1007 aa  97.1  2e-19  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_2424  HsdR family type I site-specific deoxyribonuclease  32.84 
 
 		 1016 aa  96.7  3e-19  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.831432  normal  1 
 
 
-
 
NC_013522  Taci_1543  type I site-specific deoxyribonuclease, HsdR family  27.45 
 
 		 1033 aa  93.6  2e-18  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_009707  JJD26997_1853  type I restriction enzyme EcoR124II R protein  30.41 
 
 		 989 aa  90.9  2e-17  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_0502  type I site-specific deoxyribonuclease, HsdR family  30.5 
 
 		 1015 aa  87.4  2e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  0.840857 
 
 
-
 
NC_008699  Noca_1107  HsdR family type I site-specific deoxyribonuclease  28.91 
 
 		 1013 aa  82.8  0.000000000000004  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009634  Mevan_0082  HsdR family type I site-specific deoxyribonuclease  27.44 
 
 		 1014 aa  75.1  0.0000000000009  Methanococcus vannielii SB  Archaea  normal  0.0348133  n/a   
 
 
-
 
NC_007955  Mbur_1841  HsdR family type I site-specific deoxyribonuclease  30.5 
 
 		 953 aa  67.8  0.0000000001  Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
-
 
NC_008255  CHU_3349  type I restriction-modification system R subunit  30.72 
 
 		 963 aa  62.4  0.000000005  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.531995  normal  0.015033 
 
 
-
 
NC_013037  Dfer_5242  type I site-specific deoxyribonuclease, HsdR family  29.13 
 
 		 974 aa  58.9  0.00000007  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013721  HMPREF0424_0159  hypothetical protein  26.36 
 
 		 201 aa  47.4  0.0002  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.180291 
 
 
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