12 homologs were found in PanDaTox collection
for query gene Rpic12D_1273 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012856  Rpic12D_1273  60S ribosomal protein L19  100 
 
 		 186 aa  340  9e-93  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.266743 
 
 
-
 
NC_011726  PCC8801_3295  hypothetical protein  27.38 
 
 		 133 aa  51.2  0.000008  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008784  BMASAVP1_1424  LysR family transcriptional regulator  40.22 
 
 		 439 aa  49.7  0.00003  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008530  LGAS_1663  hypothetical protein  28.57 
 
 		 2449 aa  45.8  0.0004  Lactobacillus gasseri ATCC 33323  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007953  Bxe_C1276  Outer membrane autotransporter barrel protein  32.31 
 
 		 1049 aa  44.3  0.001  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.0821611 
 
 
-
 
NC_006274  BCZK0459  internalin protein  16.28 
 
 		 1112 aa  43.5  0.002  Bacillus cereus E33L  Bacteria  normal  0.695574  n/a   
 
 
-
 
NC_007777  Francci3_4185  serine/threonine protein kinase  59.52 
 
 		 719 aa  42.7  0.003  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_1202  CheA signal transduction histidine kinases  32.89 
 
 		 736 aa  42.7  0.003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.120847  n/a   
 
 
-
 
NC_011725  BCB4264_A1095  collagen adhesion protein  41.38 
 
 		 2272 aa  42.4  0.003  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_006348  BMA1771  hypothetical protein  35.05 
 
 		 307 aa  42  0.005  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0430779  n/a   
 
 
-
 
NC_010498  EcSMS35_1767  putative autotransporter  27.17 
 
 		 1984 aa  42  0.005  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  0.209421 
 
 
-
 
NC_006349  BMAA1945  hypothetical protein  45.45 
 
 		 266 aa  41.6  0.006  Burkholderia mallei ATCC 23344  Bacteria  normal  0.549076  n/a   
 
 
-
 
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