| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4185 |
|---|
| Symbol | |
|---|
| ID | 3907150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 4993404 |
|---|
| End bp | 4995563 |
|---|
| Gene Length | 2160 bp |
|---|
| Protein Length | 719 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637881513 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_483262 |
|---|
| Protein GI | 86742862 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCTGA CCGGACCGGA GCCGGAACGG TTCATCACCG ACCGGGTGGC CGAGGCGCTC
CCCGCCTATG AGGTGACCGC CATGCTCGGG CACGGCGGTC ACGCCGTCGT CCTCGCGGGT
CGCCACCGCC GGCTCGGTCG AACCGTTGCG ATCAAGGTCC TGTCGACCAG CGCGGCGGAC
GGCGGCGCCC ACGGTCGGTT CCTGGCGGAG GCGCGCCTGC TGGCCGGACT CGACCATCCC
CACGTAGTCC GCATCTACGA CTACGTCGAA TCCGGGGACC TGTGCCTGCT CGTCATGGAA
CGACTGGCGG GCGGCACCGT GCGGGCCCGC GCGGCGAACG GGCTGACCGT CGACGTCGTC
TGCGCGATCG GGTTGGCGAC CGCCGCCGCG CTGGAATGCG CGCACGCGGG CGGGATCCTG
CACCGCGACA TCAAACCGGA CAACATTCTC TTCAGCGCCG ACGGCCTGCT GAAGGTCACC
GACTTCGGGA TCGCCAAGCT CATCGGCGCT TCCGGCGCGG CCCCGAGCAC GCTCGTCGGT
ACCCCCGTCT ACATGGCGCC GGAACAGTTC GACGGCCGGC CGCCGGGACC GGCGTGCGAC
CTGTACGCAC TCGGGATCGT CCTCTACGAA CTGCTCAGCG GCCGCCCACC GTTCGTCCGG
GCGCTATCGA TGGCGCAGCT GATGGACCAT CATCTGCGCG TCGCGCCGCA ACCACTGGAC
GCCGCGCCGC CGGCAATCGC CGCGGTGGTG GACCGGGCGC TGCGCAAGGA GCCCGGTGCA
CGCCCGCCGT CGGCCCGCGC GTTCGCCCTG GATCTCGCCG CCGCGACGGC CCATGCGCTC
GGTGCGGGCT GGCTCACCCG CTGCCCGCTG CCGCTGCGGC TCGACGACGA TGTGCGCGAC
GCGGCGCGCG GCAGTCCACC AGCCCGCACA CCACCAGCCC GCACACCACC AGCCCGCACA
CCACCAGCCC GCACACCACC AGCCCGCACA CCACCAGCCC GCACACCACC AGCCCGCACA
CCACCAGCCC GCACACCACC AGCCCGCACA CCACCAGCCC GCACACCACC AGCCCGCACA
CCACCAGCCC GCACACCACC AGCCCGCACA CCGCCGGACA CTCCGCCGTC AGCCGTCCCG
CCACCAGCCA CCGCCTCACC ACGCCGATGG TCAGCCGGCG TGATCCGGCG CCGGTCCCTG
AACCGGACCG CGCGGCGCGA CCTCCGCCCG GCCGACATCA CGTCCGCGCC GTTGCGGGTG
GACTACCCGT ACAGCGTGGT CGCCGCGCCG GATGGTGCGG TATACGTGTC CCAACGGCTA
CGCCACCGGG TGCTCCGGAT CGAACGCGAC GGCCGGACGG TTCACGTGGC CGGCTCCGGC
AAGAGCGGCC CGCACGGTGA CGGGGGGCCG GCCGTCAACG CCGAGCTGGA CAACCCGTGC
GGGCTGGCCC TGGGCCCCGA CGGTTCCCTG TTCATCGCGG ACAGCTTCAA TAATCGGATC
CGCCGGGTCG CGCCGGACGG TCGGATCGTC ACCGTCGCCG GCTCCGGCCG TCACGGCCCG
CCGGCCGGCC CCGCCGCCCG GCACGCCGCC TCGCTCAACC TGGCGCATCC GCACGGCGTC
TACGTCGACG CGGCGGGCCT GGTGTACGTC GCGAACACCG GCGGCCACCA GGTGATCCGG
ATCGACCCGG ATCTGCGGGC GGCACCGCTG GCGGGGGCGG GTGTCCCCGG CCTGTCCGGA
GATCACGGAC CCGCCCAGTT CGCCCAGCTC CGGCGCCCGC ACGACGTCAC GGCCCCGCCC
GGACGGAATG TCTACCTCGC CGACACCGAC AATCACCTGC TGCGGGCTGT CGACGCCGAC
GGGATCATCT CCACGGCCGC CGGGATGTTC TACGGCGCGT CCCCCGACGA CGGAGCCCCG
GCCCGGATCG CGGACGTCGG TCGACCCCAC TCGCTGGCGC CCACCCCCTC GGGCGGTCTG
CTGGTCACCG ACCCCGATCG GGGACGGGTC CGCCTCGTCA CCCACGATCG ACTCGTCCGC
ATCTTCGCGG ATGCCCGAAC AGGTCTGCGG CGGCCGCTCG GTGTCACCGT CCACAGCGAC
GGCACCGCCT TCGTCGTCGA CACCGCCCAG CACCTCATCC ACCGTCTCCC GGTCGCATAG
|
|---|
| Protein sequence | MRLTGPEPER FITDRVAEAL PAYEVTAMLG HGGHAVVLAG RHRRLGRTVA IKVLSTSAAD
GGAHGRFLAE ARLLAGLDHP HVVRIYDYVE SGDLCLLVME RLAGGTVRAR AANGLTVDVV
CAIGLATAAA LECAHAGGIL HRDIKPDNIL FSADGLLKVT DFGIAKLIGA SGAAPSTLVG
TPVYMAPEQF DGRPPGPACD LYALGIVLYE LLSGRPPFVR ALSMAQLMDH HLRVAPQPLD
AAPPAIAAVV DRALRKEPGA RPPSARAFAL DLAAATAHAL GAGWLTRCPL PLRLDDDVRD
AARGSPPART PPARTPPART PPARTPPART PPARTPPART PPARTPPART PPARTPPART
PPARTPPART PPDTPPSAVP PPATASPRRW SAGVIRRRSL NRTARRDLRP ADITSAPLRV
DYPYSVVAAP DGAVYVSQRL RHRVLRIERD GRTVHVAGSG KSGPHGDGGP AVNAELDNPC
GLALGPDGSL FIADSFNNRI RRVAPDGRIV TVAGSGRHGP PAGPAARHAA SLNLAHPHGV
YVDAAGLVYV ANTGGHQVIR IDPDLRAAPL AGAGVPGLSG DHGPAQFAQL RRPHDVTAPP
GRNVYLADTD NHLLRAVDAD GIISTAAGMF YGASPDDGAP ARIADVGRPH SLAPTPSGGL
LVTDPDRGRV RLVTHDRLVR IFADARTGLR RPLGVTVHSD GTAFVVDTAQ HLIHRLPVA
|
|---|
| |