17 homologs were found in PanDaTox collection
for query gene Rfer_3533 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007908  Rfer_3533  hypothetical protein  100 
 
 		 112 aa  229  8.000000000000001e-60  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_4034  hypothetical protein  70.21 
 
 		 129 aa  145  2.0000000000000003e-34  Polaromonas sp. JS666  Bacteria  normal  0.316235  normal  0.194587 
 
 
-
 
NC_008781  Pnap_3503  putative polyhydroxyalkanoic acid system protein  62.11 
 
 		 110 aa  130  9e-30  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A3086  hypothetical protein  57.73 
 
 		 115 aa  107  4.0000000000000004e-23  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.185956 
 
 
-
 
NC_012791  Vapar_0338  polyhydroxyalkanoic acid system protein  45.74 
 
 		 105 aa  94.7  4e-19  Variovorax paradoxus S110  Bacteria  normal  0.988819  n/a   
 
 
-
 
NC_009524  PsycPRwf_1172  putative polyhydroxyalkanoic acid system protein  47.37 
 
 		 106 aa  85.9  2e-16  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009524  PsycPRwf_2381  putative polyhydroxyalkanoic acid system protein  37.8 
 
 		 107 aa  67  0.00000000007  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  0.039217 
 
 
-
 
NC_008463  PA14_66890  hypothetical protein  40 
 
 		 91 aa  64.7  0.0000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_5801  hypothetical protein  40 
 
 		 91 aa  64.7  0.0000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_0388  hypothetical protein  31.58 
 
 		 91 aa  48.9  0.00002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.182376 
 
 
-
 
NC_008740  Maqu_3414  putative polyhydroxyalkanoic acid system protein  30.85 
 
 		 92 aa  47.4  0.00006  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_0455  polyhydroxyalkanoic acid system protein  28.42 
 
 		 91 aa  46.2  0.0002  Pseudomonas putida W619  Bacteria  normal  0.0870141  normal  1 
 
 
-
 
NC_009439  Pmen_0524  putative polyhydroxyalkanoic acid system protein  31.58 
 
 		 91 aa  45.4  0.0003  Pseudomonas mendocina ymp  Bacteria  normal  0.434716  normal  1 
 
 
-
 
NC_011071  Smal_2542  polyhydroxyalkanoic acid system protein  29.79 
 
 		 91 aa  44.7  0.0004  Stenotrophomonas maltophilia R551-3  Bacteria  decreased coverage  0.00484477  normal  1 
 
 
-
 
NC_010322  PputGB1_5060  polyhydroxyalkanoic acid system protein  27.66 
 
 		 91 aa  42.4  0.002  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_5010  hypothetical protein  26.32 
 
 		 111 aa  41.6  0.003  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009512  Pput_4884  putative polyhydroxyalkanoic acid system protein  26.32 
 
 		 109 aa  41.2  0.004  Pseudomonas putida F1  Bacteria  normal  1  normal  0.961245 
 
 
-
 
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