Gene Vapar_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0338 
Symbol 
ID7973482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp364402 
End bp364719 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content66% 
IMG OID644790941 
Productpolyhydroxyalkanoic acid system protein 
Protein accessionYP_002942267 
Protein GI239813357 
COG category 
COG ID 
TIGRFAM ID[TIGR02610] putative polyhydroxyalkanoic acid system protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.988819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTGACA TCCATATCGA AAGAAACCAT GCACTCGGCA TTGCCGGCGC CCGCGAAGTC 
GCACGCCAGT GGATCGAGCA GGTCGGGCAG GACTACGGCC TGGAATGCAC CTACACCGAG
GGCGAGGCCT GCGACGTCGC GCAGTTCAGC CGCGCAGGCA TCGACGGCAC GGTGGAGGTC
ACGGCCGACA CGCTGACGCT GGAGGCGACG CTGGGTTTCC TGTTCAGCAG CTTCAGCGAC
CAGATCGAGC AGAAGATCTC GCGCAAGCTC GATGCTTTGC TGGCGTCGCC CGGCGGCGGC
GGTGCCCGCT TCGCCTGA
 
Protein sequence
MPDIHIERNH ALGIAGAREV ARQWIEQVGQ DYGLECTYTE GEACDVAQFS RAGIDGTVEV 
TADTLTLEAT LGFLFSSFSD QIEQKISRKL DALLASPGGG GARFA