20 homologs were found in PanDaTox collection
for query gene Smal_2542 on replicon NC_011071
Organism: Stenotrophomonas maltophilia R551-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011071  Smal_2542  polyhydroxyalkanoic acid system protein  100 
 
 
91 aa  182  1.0000000000000001e-45  Stenotrophomonas maltophilia R551-3  Bacteria  decreased coverage  0.00484477  normal 
 
 
-
 
NC_010717  PXO_00721  putative polyhydroxyalkanoic acid system protein  62.22 
 
 
91 aa  98.2  4e-20  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.129176  n/a   
 
 
-
 
NC_007492  Pfl01_0388  hypothetical protein  43.33 
 
 
91 aa  82.8  0.000000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.182376 
 
 
-
 
NC_004578  PSPTO_5149  hypothetical protein  37.78 
 
 
92 aa  76.3  0.0000000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0390  hypothetical protein  40 
 
 
92 aa  75.9  0.0000000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0524  putative polyhydroxyalkanoic acid system protein  40 
 
 
91 aa  72.4  0.000000000002  Pseudomonas mendocina ymp  Bacteria  normal  0.434716  normal 
 
 
-
 
NC_009512  Pput_4884  putative polyhydroxyalkanoic acid system protein  37.78 
 
 
109 aa  70.5  0.000000000007  Pseudomonas putida F1  Bacteria  normal  normal  0.961245 
 
 
-
 
NC_008463  PA14_66890  hypothetical protein  41.11 
 
 
91 aa  70.5  0.000000000008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5801  hypothetical protein  41.11 
 
 
91 aa  70.5  0.000000000008  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5010  hypothetical protein  37.78 
 
 
111 aa  70.1  0.000000000009  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5060  polyhydroxyalkanoic acid system protein  36.67 
 
 
91 aa  67.8  0.00000000005  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0455  polyhydroxyalkanoic acid system protein  35.56 
 
 
91 aa  67.4  0.00000000006  Pseudomonas putida W619  Bacteria  normal  0.0870141  normal 
 
 
-
 
NC_008740  Maqu_3414  putative polyhydroxyalkanoic acid system protein  35.23 
 
 
92 aa  64.3  0.0000000006  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4034  hypothetical protein  33.33 
 
 
129 aa  55.1  0.0000003  Polaromonas sp. JS666  Bacteria  normal  0.316235  normal  0.194587 
 
 
-
 
NC_012791  Vapar_0338  polyhydroxyalkanoic acid system protein  32.22 
 
 
105 aa  53.9  0.0000008  Variovorax paradoxus S110  Bacteria  normal  0.988819  n/a   
 
 
-
 
NC_008781  Pnap_3503  putative polyhydroxyalkanoic acid system protein  32.22 
 
 
110 aa  49.7  0.00002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A3086  hypothetical protein  32.22 
 
 
115 aa  48.1  0.00004  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.185956 
 
 
-
 
NC_007908  Rfer_3533  hypothetical protein  29.79 
 
 
112 aa  44.7  0.0004  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4936  hypothetical protein  29.35 
 
 
102 aa  44.7  0.0004  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_2381  putative polyhydroxyalkanoic acid system protein  22.99 
 
 
107 aa  41.6  0.004  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.039217 
 
 
-
 
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