20 homologs were found in PanDaTox collection
for query gene RPC_3002 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_3002  fimbrial assembly  100 
 
 		 356 aa  714    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.579597  normal  0.0109704 
 
 
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NC_007964  Nham_0734  fimbrial assembly  44.66 
 
 		 352 aa  276  5e-73  Nitrobacter hamburgensis X14  Bacteria  normal  0.0675563  n/a   
 
 
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NC_009485  BBta_2619  putative general secretion pathway protein L  37.53 
 
 		 365 aa  236  5.0000000000000005e-61  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
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NC_009720  Xaut_2114  fimbrial assembly family protein  39.83 
 
 		 359 aa  201  9.999999999999999e-51  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0463917  normal  1 
 
 
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NC_009485  BBta_1285  putative general secretion pathway protein L, GspL  39.11 
 
 		 357 aa  201  1.9999999999999998e-50  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.442557  normal  1 
 
 
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NC_011666  Msil_0917  Fimbrial assembly family protein  34.97 
 
 		 377 aa  191  2e-47  Methylocella silvestris BL2  Bacteria  n/a    normal  0.51351 
 
 
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NC_010581  Bind_1590  fimbrial assembly family protein  28.52 
 
 		 355 aa  83.2  0.000000000000006  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.493789  normal  0.437646 
 
 
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NC_011894  Mnod_1788  Fimbrial assembly family protein  30.08 
 
 		 355 aa  77  0.0000000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0126663  n/a   
 
 
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NC_007484  Noc_0758  general secretion pathway protein L  26.97 
 
 		 373 aa  75.1  0.000000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0966219  n/a   
 
 
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NC_010002  Daci_1306  fimbrial assembly family protein  26.37 
 
 		 351 aa  65.1  0.000000002  Delftia acidovorans SPH-1  Bacteria  normal  0.838759  decreased coverage  0.00904381 
 
 
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NC_011365  Gdia_1521  Fimbrial assembly family protein  30.03 
 
 		 332 aa  64.7  0.000000003  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0573904  normal  0.217678 
 
 
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NC_002977  MCA1121  general secretion pathway protein l, putative  23.85 
 
 		 372 aa  61.2  0.00000002  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
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NC_008752  Aave_4153  fimbrial assembly family protein  31.13 
 
 		 437 aa  55.1  0.000002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0256547  hitchhiker  0.0000649837 
 
 
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NC_009484  Acry_0888  fimbrial assembly family protein  35.9 
 
 		 350 aa  54.3  0.000003  Acidiphilium cryptum JF-5  Bacteria  decreased coverage  0.0000454237  n/a   
 
 
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NC_010501  PputW619_2176  fimbrial assembly family protein  25.91 
 
 		 346 aa  53.5  0.000005  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
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NC_010511  M446_2027  fimbrial assembly family protein  27.62 
 
 		 353 aa  53.5  0.000005  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0299865 
 
 
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NC_010717  PXO_02683  general secretion pathway protein L  33.33 
 
 		 373 aa  48.9  0.0001  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
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NC_011071  Smal_0553  Fimbrial assembly family protein  33.33 
 
 		 379 aa  48.5  0.0002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.0642076 
 
 
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NC_010577  XfasM23_0776  fimbrial assembly family protein  25.77 
 
 		 378 aa  45.1  0.002  Xylella fastidiosa M23  Bacteria  normal  0.0393461  n/a   
 
 
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NC_010513  Xfasm12_0863  general secretory pathway protein L  24.91 
 
 		 378 aa  43.9  0.005  Xylella fastidiosa M12  Bacteria  hitchhiker  0.00948557  n/a   
 
 
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