18 homologs were found in PanDaTox collection
for query gene M446_2027 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_2027  fimbrial assembly family protein  100 
 
 
353 aa  645    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0299865 
 
 
-
 
NC_011894  Mnod_1788  Fimbrial assembly family protein  74.85 
 
 
355 aa  399  9.999999999999999e-111  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0126663  n/a   
 
 
-
 
NC_009485  BBta_1285  putative general secretion pathway protein L, GspL  33.33 
 
 
357 aa  93.2  7e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.442557  normal 
 
 
-
 
NC_010581  Bind_1590  fimbrial assembly family protein  28.73 
 
 
355 aa  85.9  9e-16  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.493789  normal  0.437646 
 
 
-
 
NC_002977  MCA1121  general secretion pathway protein l, putative  27.6 
 
 
372 aa  84.7  0.000000000000002  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2114  fimbrial assembly family protein  32.53 
 
 
359 aa  80.5  0.00000000000004  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0463917  normal 
 
 
-
 
NC_007964  Nham_0734  fimbrial assembly  29.93 
 
 
352 aa  80.5  0.00000000000004  Nitrobacter hamburgensis X14  Bacteria  normal  0.0675563  n/a   
 
 
-
 
NC_009485  BBta_2619  putative general secretion pathway protein L  28.25 
 
 
365 aa  68.9  0.0000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0917  Fimbrial assembly family protein  28.36 
 
 
377 aa  62.4  0.00000001  Methylocella silvestris BL2  Bacteria  n/a    normal  0.51351 
 
 
-
 
NC_007484  Noc_0758  general secretion pathway protein L  28.73 
 
 
373 aa  60.8  0.00000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0966219  n/a   
 
 
-
 
NC_007925  RPC_3002  fimbrial assembly  27.62 
 
 
356 aa  59.7  0.00000008  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.579597  normal  0.0109704 
 
 
-
 
NC_011365  Gdia_1521  Fimbrial assembly family protein  29.77 
 
 
332 aa  59.3  0.00000009  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0573904  normal  0.217678 
 
 
-
 
NC_010501  PputW619_2176  fimbrial assembly family protein  27.76 
 
 
346 aa  55.8  0.0000009  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3310  general secretion pathway protein L, putative  26.34 
 
 
354 aa  51.2  0.00003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3144  fimbrial assembly  25.27 
 
 
364 aa  48.1  0.0002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.366648  normal 
 
 
-
 
NC_011071  Smal_0553  Fimbrial assembly family protein  30.6 
 
 
379 aa  47.4  0.0004  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0642076 
 
 
-
 
NC_008752  Aave_4153  fimbrial assembly family protein  28.15 
 
 
437 aa  47  0.0005  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0256547  hitchhiker  0.0000649837 
 
 
-
 
NC_010338  Caul_2095  fimbrial assembly family protein  25.64 
 
 
345 aa  43.9  0.005  Caulobacter sp. K31  Bacteria  normal  0.0807472  normal  0.408205 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>