Gene Smal_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0553 
Symbol 
ID6477457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp656792 
End bp657931 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content70% 
IMG OID642729698 
ProductFimbrial assembly family protein 
Protein accessionYP_002026941 
Protein GI194364331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0642076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTT GGCAGGACAG TCTGCGGCAG GTTCAGGGTC GGATCGGCCC GGGCGCTGGC 
CGCTTCCTGC GCTGGTGGCG GCAATCGCTG CTGGCGTGGG TGCCGGCACG TTGGCAGTGG
GCGCTGGGTT GGGCGCAGGC GCGCCTGCTG CTGCAGCGCG AGGGTGACCA GCTGCAGGTC
CGGCGTGAGG CCGGCGAACG CCGCGAAGCG GTGGCGACGT TGCCGTGGCC GTTGTCGCCG
GCTGAACTGG ACCGTGTTCT GGAGCCGCGC CTGCGCAGCC TGCCGCGGGT GTGGCTGTTG
CCGGCCAATG AAGTGCTGCG CCGCCATCTT CGGCTGCCGG CGGCGGCGGC CGATCGCCTG
CGCGCGGTGG TCGGCTTCGA GATCGACCGG CAGACTCCAT TCGAATCCAG CCAGGTCAGC
TATGACGTGC GTGAACTGGG CAGCGCCGGT GAAGGCCTGT TGCAGGTTGA ACTGATCGCC
TGGCCGCTGC GCCAGCTGGA CGCCTGGCGT GGCAGCGTGG GCGAGTGGGC CGATACGTTG
GCCGCCGTCG ACGCGATCGA TGCGCAGGGT GATCCGCTGC ACGTGAATCT GCTACCGCCC
GCGCAGCGCC AGCTGCGGCC AGACCCGATG CGGCGCTGGA ACCTGCTGCT GGCCCTGGCC
GCGCTGGTGA TGCTGGTGCT GGCCGCGGTG CAGCTGCTCG ACAACCGCCG CGCCGCCGCC
GATGAACTGC GTGCCCAGGT TGAACGCAGC GCGCGCAGTG CGCGTGGCGT GGCCAGCGAA
CGTGCACAGC TGCAGGGGCT GATCGACGGT GCCGCGTTCC TCGAAAAGCA GCGCAGCCAG
CGTGCCGGCA CGGTGGAAAT CTGGAATGAA CTGACCCGGC GCCTCCCGGA GGGCACCTAC
CTGGAAAAGC TGGCCATCGA GAACAACAAC CTGCAGCTGA TCGGGCTCAG CCGCGAGGCC
TCGCAGCTGG TGCAGCTGCT GCAGGACGCG CCGCAGTGGC GCAAGGTCAA CCTGACCGGC
GTGCTGCAGG CCGACGGTGC CGCCAGTGGC CGTGACCGTT TCACCATGAC CGCTGAACTG
CAGCCGATGG CGGCTGCGAA CGGGGAGGCG GCCGATGCCG ATGCCAAGCG CGCGCCGTGA
 
Protein sequence
MTAWQDSLRQ VQGRIGPGAG RFLRWWRQSL LAWVPARWQW ALGWAQARLL LQREGDQLQV 
RREAGERREA VATLPWPLSP AELDRVLEPR LRSLPRVWLL PANEVLRRHL RLPAAAADRL
RAVVGFEIDR QTPFESSQVS YDVRELGSAG EGLLQVELIA WPLRQLDAWR GSVGEWADTL
AAVDAIDAQG DPLHVNLLPP AQRQLRPDPM RRWNLLLALA ALVMLVLAAV QLLDNRRAAA
DELRAQVERS ARSARGVASE RAQLQGLIDG AAFLEKQRSQ RAGTVEIWNE LTRRLPEGTY
LEKLAIENNN LQLIGLSREA SQLVQLLQDA PQWRKVNLTG VLQADGAASG RDRFTMTAEL
QPMAAANGEA ADADAKRAP