Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0553 |
Symbol | |
ID | 6477457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 656792 |
End bp | 657931 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642729698 |
Product | Fimbrial assembly family protein |
Protein accession | YP_002026941 |
Protein GI | 194364331 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0642076 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGCTT GGCAGGACAG TCTGCGGCAG GTTCAGGGTC GGATCGGCCC GGGCGCTGGC CGCTTCCTGC GCTGGTGGCG GCAATCGCTG CTGGCGTGGG TGCCGGCACG TTGGCAGTGG GCGCTGGGTT GGGCGCAGGC GCGCCTGCTG CTGCAGCGCG AGGGTGACCA GCTGCAGGTC CGGCGTGAGG CCGGCGAACG CCGCGAAGCG GTGGCGACGT TGCCGTGGCC GTTGTCGCCG GCTGAACTGG ACCGTGTTCT GGAGCCGCGC CTGCGCAGCC TGCCGCGGGT GTGGCTGTTG CCGGCCAATG AAGTGCTGCG CCGCCATCTT CGGCTGCCGG CGGCGGCGGC CGATCGCCTG CGCGCGGTGG TCGGCTTCGA GATCGACCGG CAGACTCCAT TCGAATCCAG CCAGGTCAGC TATGACGTGC GTGAACTGGG CAGCGCCGGT GAAGGCCTGT TGCAGGTTGA ACTGATCGCC TGGCCGCTGC GCCAGCTGGA CGCCTGGCGT GGCAGCGTGG GCGAGTGGGC CGATACGTTG GCCGCCGTCG ACGCGATCGA TGCGCAGGGT GATCCGCTGC ACGTGAATCT GCTACCGCCC GCGCAGCGCC AGCTGCGGCC AGACCCGATG CGGCGCTGGA ACCTGCTGCT GGCCCTGGCC GCGCTGGTGA TGCTGGTGCT GGCCGCGGTG CAGCTGCTCG ACAACCGCCG CGCCGCCGCC GATGAACTGC GTGCCCAGGT TGAACGCAGC GCGCGCAGTG CGCGTGGCGT GGCCAGCGAA CGTGCACAGC TGCAGGGGCT GATCGACGGT GCCGCGTTCC TCGAAAAGCA GCGCAGCCAG CGTGCCGGCA CGGTGGAAAT CTGGAATGAA CTGACCCGGC GCCTCCCGGA GGGCACCTAC CTGGAAAAGC TGGCCATCGA GAACAACAAC CTGCAGCTGA TCGGGCTCAG CCGCGAGGCC TCGCAGCTGG TGCAGCTGCT GCAGGACGCG CCGCAGTGGC GCAAGGTCAA CCTGACCGGC GTGCTGCAGG CCGACGGTGC CGCCAGTGGC CGTGACCGTT TCACCATGAC CGCTGAACTG CAGCCGATGG CGGCTGCGAA CGGGGAGGCG GCCGATGCCG ATGCCAAGCG CGCGCCGTGA
|
Protein sequence | MTAWQDSLRQ VQGRIGPGAG RFLRWWRQSL LAWVPARWQW ALGWAQARLL LQREGDQLQV RREAGERREA VATLPWPLSP AELDRVLEPR LRSLPRVWLL PANEVLRRHL RLPAAAADRL RAVVGFEIDR QTPFESSQVS YDVRELGSAG EGLLQVELIA WPLRQLDAWR GSVGEWADTL AAVDAIDAQG DPLHVNLLPP AQRQLRPDPM RRWNLLLALA ALVMLVLAAV QLLDNRRAAA DELRAQVERS ARSARGVASE RAQLQGLIDG AAFLEKQRSQ RAGTVEIWNE LTRRLPEGTY LEKLAIENNN LQLIGLSREA SQLVQLLQDA PQWRKVNLTG VLQADGAASG RDRFTMTAEL QPMAAANGEA ADADAKRAP
|
| |