19 homologs were found in PanDaTox collection
for query gene BBta_2619 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_2619  putative general secretion pathway protein L  100 
 
 
365 aa  725    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0734  fimbrial assembly  39.4 
 
 
352 aa  228  2e-58  Nitrobacter hamburgensis X14  Bacteria  normal  0.0675563  n/a   
 
 
-
 
NC_007925  RPC_3002  fimbrial assembly  37.53 
 
 
356 aa  224  1e-57  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.579597  normal  0.0109704 
 
 
-
 
NC_009485  BBta_1285  putative general secretion pathway protein L, GspL  41.84 
 
 
357 aa  199  7e-50  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.442557  normal 
 
 
-
 
NC_011666  Msil_0917  Fimbrial assembly family protein  40.07 
 
 
377 aa  191  2e-47  Methylocella silvestris BL2  Bacteria  n/a    normal  0.51351 
 
 
-
 
NC_009720  Xaut_2114  fimbrial assembly family protein  39.7 
 
 
359 aa  180  2.9999999999999997e-44  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0463917  normal 
 
 
-
 
NC_010581  Bind_1590  fimbrial assembly family protein  27.59 
 
 
355 aa  86.7  5e-16  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.493789  normal  0.437646 
 
 
-
 
NC_002977  MCA1121  general secretion pathway protein l, putative  27.17 
 
 
372 aa  75.9  0.000000000001  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1788  Fimbrial assembly family protein  26.48 
 
 
355 aa  66.2  0.0000000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0126663  n/a   
 
 
-
 
NC_007484  Noc_0758  general secretion pathway protein L  26.76 
 
 
373 aa  60.8  0.00000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0966219  n/a   
 
 
-
 
NC_009484  Acry_0888  fimbrial assembly family protein  38.16 
 
 
350 aa  57  0.0000005  Acidiphilium cryptum JF-5  Bacteria  decreased coverage  0.0000454237  n/a   
 
 
-
 
NC_010577  XfasM23_0776  fimbrial assembly family protein  25.19 
 
 
378 aa  52  0.00002  Xylella fastidiosa M23  Bacteria  normal  0.0393461  n/a   
 
 
-
 
NC_011071  Smal_0553  Fimbrial assembly family protein  28.97 
 
 
379 aa  51.2  0.00003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0642076 
 
 
-
 
NC_010513  Xfasm12_0863  general secretory pathway protein L  30 
 
 
378 aa  50.8  0.00004  Xylella fastidiosa M12  Bacteria  hitchhiker  0.00948557  n/a   
 
 
-
 
NC_008752  Aave_4153  fimbrial assembly family protein  34.62 
 
 
437 aa  49.3  0.0001  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0256547  hitchhiker  0.0000649837 
 
 
-
 
NC_011365  Gdia_1521  Fimbrial assembly family protein  34.72 
 
 
332 aa  48.1  0.0002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0573904  normal  0.217678 
 
 
-
 
NC_010511  M446_2027  fimbrial assembly family protein  42.62 
 
 
353 aa  47.8  0.0003  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0299865 
 
 
-
 
NC_010002  Daci_1306  fimbrial assembly family protein  29.91 
 
 
351 aa  47.8  0.0003  Delftia acidovorans SPH-1  Bacteria  normal  0.838759  decreased coverage  0.00904381 
 
 
-
 
NC_010717  PXO_02683  general secretion pathway protein L  28.41 
 
 
373 aa  43.1  0.007  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>