| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1306 |
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| Symbol | |
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| ID | 5746861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1450685 |
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| End bp | 1451740 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641296385 |
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| Product | fimbrial assembly family protein |
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| Protein accession | YP_001562335 |
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| Protein GI | 160896753 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.838759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00904381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGCCTGC CGCTGCTGCG CCGCAGCCTT CCCGCTGCCT TGGTGCGTGT CGTGAAGGCT
GATGGAGGGC TCGCCCATGC GTGGGTGCGT GCAGGCCAGT GGCATTGGGC CGTTGAACGC
GAGGCAAGCG GACGCAAGCC TTCAGGCTCG GCCGTGCTGA TGGGCGGTGA TCAACTGCTG
CTGCGCACCT TGCGTATGCC TTCGCTGTCT GCTCAGGCAT TGCACGGTGC TGTGGCGCTG
GATGTGCAGA CCATGTCGCC GTTTCCCGCG CTCGAGACGC TCTGGGCCTA TGTGGTGGCC
ACGGACCCCG CAGGAGGGCA GCGTGTGGAG CTGGTGATCA CGTCGAATGC GCTGGTGCAG
CAAGCCCTGC GGGATGCCGC TGGCCAGTTG GCCGGACAGG CGCAGCCGGA GATCTGGGCC
AGCACATCGA CCATGCCTGT GCTGCTCGCA GGCTTTGGCG AGGGGCCGCG GCTGGCCCGT
GAATCCCGGC AACGCCGATG GATTGGTGCG GGCCTTGCGG CCATCGTGGC GGCAGGCCTG
GCCCTGGCCA TCACGCCGAC TGCCAAGCTG TATCTGCAAG CCGTCGACGC CAGCAGGAAA
TTCGACCAGA TCGTGCGCGA GACACGGGAG GTGACGGCCC AGCGCCAGGG CCTGGTGACC
GGGGTCGAGG AGATTGCCGC GCTTCAGAAG CTGCAGCGCG AGCAGATCAA TCACCTGCAG
GTCATGGCAG CGCTCACACA ATTGTTTCCC GATGACACGG CTGTACAGCG GGTATCGTTC
AGTGGATCCA AGCTGGCGAT CCAAGGCCTC AGCAGCAATG CATCCAACGT GGTGCAGCTC
ATGTCCAAGG CTCCGGGCTT TTTGGAGGTG CGCATGCCCT CAGCCGTGAC GAGGGCGTCG
GGATCCAACA AGGAAAGCTA CACCGTCGAG GCCGTGCTGG ACCCCAAGGT CTTTGGCGTC
CTGGCTTCGC CTGAAGCAGA AGCACAGGCA GCTCCTGACG CTACCAGCGA AACGCCTGAA
ACCCCTGCTG CGGCAGAAAA GAAAGGCACA CCATGA
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| Protein sequence | MGLPLLRRSL PAALVRVVKA DGGLAHAWVR AGQWHWAVER EASGRKPSGS AVLMGGDQLL
LRTLRMPSLS AQALHGAVAL DVQTMSPFPA LETLWAYVVA TDPAGGQRVE LVITSNALVQ
QALRDAAGQL AGQAQPEIWA STSTMPVLLA GFGEGPRLAR ESRQRRWIGA GLAAIVAAGL
ALAITPTAKL YLQAVDASRK FDQIVRETRE VTAQRQGLVT GVEEIAALQK LQREQINHLQ
VMAALTQLFP DDTAVQRVSF SGSKLAIQGL SSNASNVVQL MSKAPGFLEV RMPSAVTRAS
GSNKESYTVE AVLDPKVFGV LASPEAEAQA APDATSETPE TPAAAEKKGT P
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