16 homologs were found in PanDaTox collection
for query gene PSPTO_3310 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_3310  general secretion pathway protein L, putative  100 
 
 		 354 aa  712    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
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NC_007005  Psyr_3144  fimbrial assembly  90.06 
 
 		 364 aa  630  1e-179  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.366648  normal  1 
 
 
-
 
NC_010501  PputW619_2176  fimbrial assembly family protein  44.44 
 
 		 346 aa  250  3e-65  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002977  MCA1121  general secretion pathway protein l, putative  31.06 
 
 		 372 aa  135  9.999999999999999e-31  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_0758  general secretion pathway protein L  30.42 
 
 		 373 aa  129  9.000000000000001e-29  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0966219  n/a   
 
 
-
 
NC_011071  Smal_0553  Fimbrial assembly family protein  30.34 
 
 		 379 aa  98.6  1e-19  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.0642076 
 
 
-
 
NC_010338  Caul_2095  fimbrial assembly family protein  32.73 
 
 		 345 aa  95.1  2e-18  Caulobacter sp. K31  Bacteria  normal  0.0807472  normal  0.408205 
 
 
-
 
NC_010717  PXO_02683  general secretion pathway protein L  30.08 
 
 		 373 aa  94  3e-18  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010577  XfasM23_0776  fimbrial assembly family protein  28.2 
 
 		 378 aa  92  1e-17  Xylella fastidiosa M23  Bacteria  normal  0.0393461  n/a   
 
 
-
 
NC_010513  Xfasm12_0863  general secretory pathway protein L  27.88 
 
 		 378 aa  85.1  0.000000000000002  Xylella fastidiosa M12  Bacteria  hitchhiker  0.00948557  n/a   
 
 
-
 
NC_011365  Gdia_1521  Fimbrial assembly family protein  26.87 
 
 		 332 aa  59.7  0.00000008  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0573904  normal  0.217678 
 
 
-
 
NC_009485  BBta_1285  putative general secretion pathway protein L, GspL  25.91 
 
 		 357 aa  56.2  0.0000009  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.442557  normal  1 
 
 
-
 
NC_010511  M446_2027  fimbrial assembly family protein  25.29 
 
 		 353 aa  49.7  0.00007  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0299865 
 
 
-
 
NC_011894  Mnod_1788  Fimbrial assembly family protein  24.23 
 
 		 355 aa  48.1  0.0002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0126663  n/a   
 
 
-
 
NC_011666  Msil_0917  Fimbrial assembly family protein  23.26 
 
 		 377 aa  47.8  0.0003  Methylocella silvestris BL2  Bacteria  n/a    normal  0.51351 
 
 
-
 
NC_010581  Bind_1590  fimbrial assembly family protein  22.82 
 
 		 355 aa  46.6  0.0007  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.493789  normal  0.437646 
 
 
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