| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3144 |
|---|
| Symbol | |
|---|
| ID | 3368665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 3770226 |
|---|
| End bp | 3771320 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637653489 |
|---|
| Product | fimbrial assembly |
|---|
| Protein accession | YP_236214 |
|---|
| Protein GI | 66046373 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.366648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCAT CAGTTTCTGC ACGTCTGGCG CCTGTTTACG CGTTACGCGA ACAGGTCGCC
CGGCAGTGGC GTGGCAGTCC GGCGCAACAC GCCTGGCAAT GGTGGGTGGC GGAGCTTCGC
GCCTGCCTGC CGCCGCGTGT GCGTCGATGG CTGGGCCGCG AGACCGTGGA GCAGGCGCTT
GTCTGGCCAT TGGTCGAGCC GCTGCCGGAC GCATCGCCCC AGGTGCGGCG GGTATTGCTG
TTGCCGCCGT CGGCTGTGCT GTTGCAGACC CTGCAGCTTC CTGCGGCTGC GGCACGCAAT
CTGTCGACCG TGGTCGGCTA CGAGCTGGAT CGTTTCACAC CATTTGACGC TGGCCAGTTG
TACTTCGTCG CCCGTCAGGA CAGTCGCAGC GCCAGCTTTG TGCAGGTCAC GCTGGTGGCA
ATCCTGCGCG AGCGGCTGGA CGCGATACTC AGTGAGTGCG CCGAGCGGGG CTTGCGTCCC
GATGCCGTCG ACGTCGGCAC GGATGTGGGT GCTGAGCACC TGACTGCAGG GCAGCGCATG
GGGATTGATC TGCTGCCGAT GCCACTGCGC CCGCAACAGT CGCGCTCCGG CCATCGCTTG
CAGCGCGGGC TGATCTGGCT GTGTGCCGGC CTGCTGCTGA GCGCCATGTT GCTGTGGCTG
AACGACCGAC AGAGCCTGCT CGAGGACATG CAGGCCAGCG TCAAGGAGCA GAAGGCTCAG
GTTGGCGAGG TCCAACAACT GCGCCAGCAA CTGACCAACA CCCTGGGCGC CGCCAACTAC
CTGTTGCGCC GCAAGGCGGC GCAGCCGCCG CTCTCGGCGC TGCTCAGCGA GCTGACCGCC
TGCCTGCCTT CTGACACCTG GATCGAGCAT ATGGAAATCA GCGACAGTGC CGAGGTGGCC
TTTTCCGGCC AGAGCGCCAA GGCCAGTGCG CTGATCGGCC GCGTCAAGGA CTGCCGAAGT
CTGGATAATG CGCAGTTTCA GGGGGTGATC CAGCCCGACA CCAAAACCGG CAAGGATCAG
TATTCCCTGC GCGCGCATTT GCACCAGAAC CAGCAGCAGG AGAACGCCGA TGCGCCGTCC
ACTGACAAGC CGTGA
|
|---|
| Protein sequence | MNSSVSARLA PVYALREQVA RQWRGSPAQH AWQWWVAELR ACLPPRVRRW LGRETVEQAL
VWPLVEPLPD ASPQVRRVLL LPPSAVLLQT LQLPAAAARN LSTVVGYELD RFTPFDAGQL
YFVARQDSRS ASFVQVTLVA ILRERLDAIL SECAERGLRP DAVDVGTDVG AEHLTAGQRM
GIDLLPMPLR PQQSRSGHRL QRGLIWLCAG LLLSAMLLWL NDRQSLLEDM QASVKEQKAQ
VGEVQQLRQQ LTNTLGAANY LLRRKAAQPP LSALLSELTA CLPSDTWIEH MEISDSAEVA
FSGQSAKASA LIGRVKDCRS LDNAQFQGVI QPDTKTGKDQ YSLRAHLHQN QQQENADAPS
TDKP
|
|---|
| |