12 homologs were found in PanDaTox collection
for query gene RPB_2165 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007778  RPB_2165  transmembrane protein  100 
 
 		 390 aa  778    Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.0585637 
 
 
-
 
NC_003295  RSc1503  hypothetical protein  38.76 
 
 		 549 aa  195  1e-48  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.522768 
 
 
-
 
NC_010571  Oter_2077  electron transport protein SCO1/SenC  28.4 
 
 		 296 aa  62.4  0.00000001  Opitutus terrae PB90-1  Bacteria  normal  0.0831544  normal  0.489667 
 
 
-
 
NC_010571  Oter_1801  electron transport protein SCO1/SenC  35.56 
 
 		 291 aa  56.2  0.000001  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.53156 
 
 
-
 
NC_013501  Rmar_1172  electron transport protein SCO1/SenC  28.11 
 
 		 283 aa  50.1  0.00008  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4695  hypothetical protein  38.71 
 
 		 235 aa  49.3  0.0001  Cupriavidus metallidurans CH34  Bacteria  normal  0.0489031  normal  0.712544 
 
 
-
 
NC_008009  Acid345_3047  electron transport protein SCO1/SenC  23.96 
 
 		 282 aa  47.4  0.0005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_1843  electron transport protein SCO1/SenC  34.25 
 
 		 205 aa  46.6  0.0007  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.607401 
 
 
-
 
NC_003295  RSc2292  putative transmembrane protein  34.94 
 
 		 207 aa  46.2  0.001  Ralstonia solanacearum GMI1000  Bacteria  normal  0.765986  normal  1 
 
 
-
 
NC_007614  Nmul_A2665  electron transport protein SCO1/SenC  31.76 
 
 		 204 aa  46.2  0.001  Nitrosospira multiformis ATCC 25196  Bacteria  hitchhiker  0.00000706149  n/a   
 
 
-
 
NC_007964  Nham_2710  electron transport protein SCO1/SenC  29.67 
 
 		 205 aa  45.1  0.002  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_2997  electron transport protein SCO1/SenC  33.75 
 
 		 280 aa  43.1  0.009  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  hitchhiker  0.00100576 
 
 
-
 
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