| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1503 |
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| Symbol | |
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| ID | 1220332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1608222 |
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| End bp | 1609871 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637237886 |
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| Product | hypothetical protein |
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| Protein accession | NP_519624 |
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| Protein GI | 17546222 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.522768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGTCCG GTCTCCTGCC GTGGACACAG GAGCGCTTCA AAGCGGCGGT GGCCGAGGCC
GCCGCGCAGC CGGATTGCTC CGCCCGCACG CAGGCGCTGC TGGTCCTGAT GCGGGAGGAG
CACCCGGCGT ATGTCCAATG CAGCGCGGCG GAAGTGGTGC GCCGGCGCGG CTGGGTGCTG
GTCGAACTCG GCAACGCGGG CCTGGAGCCG GCGGCCATGC CCATCGTGCT GGAGGAGCTC
GAGACAGGCC ACCAGCCCTA CCTCCTCGCC GCCGCGGCGC GCGCGCTGCG TCAGGCGGAG
GCGCCCAGCC CCGCGCTGGC GCCGATCCTG CTGCGAGCGC TCGAGGCGCT GGCGCGCCGC
GACGATCTGG TGGACCTGAC GGTGTGGGGC GGGACGGCGG CATCCGACGC CGCCGGCTCG
GCACTGGGCG AGGCCCTGGC CACGCTGCGC TGGCTGGCGC CGCAAGCGCA TGGCATCCGG
CAGGGTCTGC GAGACCTGGC GGATGGCGCG GCCGGCCCGC TGGCCGAAGA CCATCGGCTG
GCCGTGCAGG CGGTGCTGGA CGACATCGCG GCCCGTGACC TGCCGGACAG CAGCGATTGC
TGCGCATTGC CCCTGTCCTG GCGCAGGTTT GCATCCGGCG GCGATGCCGC GGCACCGATC
TCCACTGTGT GTTTCGAAGA TCAGGACGGC GTCAGCGTTT CCTGGGACCG CCTGTTCCTG
GGCCAGCCGA GCGTCGTCGC GTTCTTTTAC ACGCGCTGCG ACAACGAGCA GAAATGCTCG
CTCACCGTCA GCCAGCTGGC GCAAGTGCAG CGCCTGCTCG TGTCGGCCGG CGCACAGACG
TCGGTTCGCC TAGCGGCCAT CACCTATGAC CCGGACTTCG ACCTGCCCCA CCGGTTGCGT
GGCTATGCCG AGAGCCGCAG CCTGGTGCCG GGGGCGCATT GCCGGATGCT CAGGACGACG
CAGGGCAGGG ACGCGCTGCA GGACTACTTC ACGCTGGGCG TGAACTTTGC CGGGTCCGTG
GTGAACCGTC ATCGCATCGA GGTCTTCGTG CTCGATGCAT CGGGCAGGAT CCGGGCGACC
TATCAGCGGC TGGGCTGGGA TCCGGTCGAG CTGGTCAACG AGGTGCAGCG GATCACGAAC
GCGCCGGAGC GGATCGCCGA AGGGCAGGGC AAGGGTGTGG CGATCACCGG TACGGCCCCC
GGCCTGTGGG CGCTACTGCT GGCGCTGCTG CCCAAATGCC CGATCTGCGG AGCGACCTAC
CTGAGCAGTT CGGGGCTCCT TGCCTTGCCG TATCTGTCGG GCTGGCAGCA ATCCTGGCCG
GCGATCCTGC TGCTGCTGAT CATCAATCTG GCCGCGATGG CATGGTTCGC GCGCTCGCGC
AAGCGATGGT GGGCACTGGC GTGGTCCGTT GCCGGCGCGG TCACGCTGAT CGGTCCGGGG
CTCGCGCTTG GCCATGCAAT GGCGATGGTG CTTGGTGCCG CATTCACCGC TGTCGGATCG
CTGCTGGCAG CGGCCGCTGT CGTACCAGGC ATCCGGGGCG GGGGGCGTGG CCCGGGCATC
GGCTCCGTCC GGCGCCCGCG CCGCCCGGCC GGGCGGACCG TTCCGCTTGT GCGGCAGGCA
GCCACCGGCG AGTCGCCGCC GCCATCGTGA
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| Protein sequence | MASGLLPWTQ ERFKAAVAEA AAQPDCSART QALLVLMREE HPAYVQCSAA EVVRRRGWVL
VELGNAGLEP AAMPIVLEEL ETGHQPYLLA AAARALRQAE APSPALAPIL LRALEALARR
DDLVDLTVWG GTAASDAAGS ALGEALATLR WLAPQAHGIR QGLRDLADGA AGPLAEDHRL
AVQAVLDDIA ARDLPDSSDC CALPLSWRRF ASGGDAAAPI STVCFEDQDG VSVSWDRLFL
GQPSVVAFFY TRCDNEQKCS LTVSQLAQVQ RLLVSAGAQT SVRLAAITYD PDFDLPHRLR
GYAESRSLVP GAHCRMLRTT QGRDALQDYF TLGVNFAGSV VNRHRIEVFV LDASGRIRAT
YQRLGWDPVE LVNEVQRITN APERIAEGQG KGVAITGTAP GLWALLLALL PKCPICGATY
LSSSGLLALP YLSGWQQSWP AILLLLIINL AAMAWFARSR KRWWALAWSV AGAVTLIGPG
LALGHAMAMV LGAAFTAVGS LLAAAAVVPG IRGGGRGPGI GSVRRPRRPA GRTVPLVRQA
ATGESPPPS
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