| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2165 |
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| Symbol | |
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| ID | 3909945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2456474 |
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| End bp | 2457646 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637884059 |
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| Product | transmembrane protein |
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| Protein accession | YP_485782 |
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| Protein GI | 86749286 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0585637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTGG CCGCGACGCC ACCGATCGCG TCGAGCGAGG CGGGGTCGCT CGACGCCGGC
TACGCGGCGA TCGACCGGCT CCGCGCCGAC CCGTCCGGAC GCGACGCGTT GGTCGCGCTG
CTGGCGGAGC AGTCGCCGCT GTTCGCCGGC CGCAGCAGCA ACCAGGCGGC GCGGCTGCGC
GGCTATGTGC TCGCCGCCTT CGAGACCTGC GGATTGCCGG ACGCGGCGAT GAGCATCGTC
TGCGAGGAGC TGGAGAGCGG CATAGATCCG TTCGTCGTGG CCGCCGCCGC CCGGGCGGTC
CGCTGCGCAT CCACGACTCC GGCTGAACTG CCCGCGCTGC TGCTCGCGGC AATCCGCAGG
CTGCGCGGCG CCGACGACGT CGTCACGCTC GCGCCGGCCG ATGCGGCTGC GCCCGTGACC
GTTTTGACCG AGCTGTTCCG GACGCTGCGC TGGCTCGGTC CGCGCGCCGC GGGGGTCGCG
GCACCATTCG CCGAACTCTT GTCGCACGAT CAGGCGATGC TGTCAGACAC CGTGCGGCGC
GAAGGCCGGC TCGCGCTCGG CGCGATCCGC AGCGCGGCGG AGTCGGCGCC GCCATCTTGC
TGCGGCGCGC CGGCGCCGCT CGTGCTGCCG CACGACAACA GCGTACCCGC TGATGCCGAC
ATCGATGTCG CCGCCATCGC ATTACAGGAC CAAGATGGCT CGGTCGCAAG CTTCGGCGAG
ATATTTCGCG GCCGGCCGAG CGTGCTGACG TTCTTCTACA CGCGTTGCGC CAATCCCAAC
AAATGCTCGC TGACGATCCA AAAGCTTGCG CAACTGCAGA CGCTGATCGC AGAGGCCGGC
CTCCCCGAGG TCGTCAACGT CGCCGCGATC AGCTATGATG GCGCGTTCGA TCTGCCGCAT
CGGTTGCGCA CCTATGGCGA GGCGCGTGGA ATGCGCTTCG ACCGGTTCAA CCGCATGCTG
CGGACCATCG GCGATTTCGA GCCGGTGCGG CGATGGCTCG ATCTCGGCGT CGGCTACGGC
GCCACCACGG TCAATCATCA TCGGCTCGAT CTCGTTGTAC TCGACCGCAG CATGCGCTGT
GTCGAGCGGA TAGCACGCAG GCAATGGAAC GAGCACGAAT TGTTTGACAT AATCCGTCGC
GCGCTTCGTA ACGACGGAAA TGTGCAGACC TGA
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| Protein sequence | MTVAATPPIA SSEAGSLDAG YAAIDRLRAD PSGRDALVAL LAEQSPLFAG RSSNQAARLR
GYVLAAFETC GLPDAAMSIV CEELESGIDP FVVAAAARAV RCASTTPAEL PALLLAAIRR
LRGADDVVTL APADAAAPVT VLTELFRTLR WLGPRAAGVA APFAELLSHD QAMLSDTVRR
EGRLALGAIR SAAESAPPSC CGAPAPLVLP HDNSVPADAD IDVAAIALQD QDGSVASFGE
IFRGRPSVLT FFYTRCANPN KCSLTIQKLA QLQTLIAEAG LPEVVNVAAI SYDGAFDLPH
RLRTYGEARG MRFDRFNRML RTIGDFEPVR RWLDLGVGYG ATTVNHHRLD LVVLDRSMRC
VERIARRQWN EHELFDIIRR ALRNDGNVQT
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