19 homologs were found in PanDaTox collection
for query gene PputW619_2177 on replicon NC_010501
Organism: Pseudomonas putida W619



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010501  PputW619_2177  general secretion pathway protein GspK  100 
 
 
237 aa  469  1.0000000000000001e-131  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3311  general secretion pathway protein K, putative  46.67 
 
 
244 aa  176  2e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.574395  n/a   
 
 
-
 
NC_007005  Psyr_3145  general secretion pathway protein K, putative  45.71 
 
 
244 aa  177  2e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.132735  normal 
 
 
-
 
NC_010513  Xfasm12_0862  general secretory pathway protein K  27.9 
 
 
281 aa  96.3  3e-19  Xylella fastidiosa M12  Bacteria  hitchhiker  0.00384723  n/a   
 
 
-
 
NC_010577  XfasM23_0775  general secretion pathway protein K  27.9 
 
 
281 aa  95.5  7e-19  Xylella fastidiosa M23  Bacteria  normal  0.148294  n/a   
 
 
-
 
NC_010717  PXO_02682  general secretion pathway protein K  29.03 
 
 
283 aa  95.1  9e-19  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_0552  General secretion pathway protein K  27.4 
 
 
287 aa  88.6  8e-17  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0965369 
 
 
-
 
NC_002977  MCA1120  general secretion pathway protein K  28.86 
 
 
312 aa  75.9  0.0000000000005  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0757  general secretion pathway protein K  26.5 
 
 
294 aa  63.9  0.000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.408442  n/a   
 
 
-
 
NC_011365  Gdia_1517  putative general secretion pathway protein K  27 
 
 
269 aa  53.9  0.000002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.412806 
 
 
-
 
NC_008752  Aave_4154  general secretory pathway protein K  25.3 
 
 
286 aa  53.9  0.000002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.177743  hitchhiker  0.0000571995 
 
 
-
 
NC_007964  Nham_0735  putative general secretory pathway protein K  29.03 
 
 
304 aa  52.4  0.000006  Nitrobacter hamburgensis X14  Bacteria  normal  0.374633  n/a   
 
 
-
 
NC_009485  BBta_1284  putative general secretion pathway protein K, GspK  25.29 
 
 
314 aa  49.7  0.00004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.325322  normal 
 
 
-
 
NC_011666  Msil_0916  putative general secretion pathway protein K  21.88 
 
 
293 aa  48.9  0.00007  Methylocella silvestris BL2  Bacteria  n/a    normal  0.576382 
 
 
-
 
NC_009484  Acry_0884  hypothetical protein  27.57 
 
 
265 aa  48.9  0.00007  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2617  putative general secretion pathway protein K  23.71 
 
 
314 aa  48.5  0.00008  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2113  putative general secretion pathway protein K  24.5 
 
 
313 aa  45.1  0.001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0302049  normal 
 
 
-
 
NC_010002  Daci_1305  general secretory pathway protein K  26.09 
 
 
262 aa  43.1  0.004  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.0140544 
 
 
-
 
NC_011666  Msil_1757  putative general secretion pathway protein K  23.2 
 
 
291 aa  42.7  0.005  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>