| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4154 |
|---|
| Symbol | |
|---|
| ID | 4669602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4608636 |
|---|
| End bp | 4609496 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639825341 |
|---|
| Product | general secretory pathway protein K |
|---|
| Protein accession | YP_972469 |
|---|
| Protein GI | 120612791 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3156] Type II secretory pathway, component PulK |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.177743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000571995 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCGC CTGTCCACTA CCGTGCCGGC CGCTCGTCGC GTGGCATGGC ACTCATCGCG
GTGCTCTGGA TCGTGGCGTC GCTCAGCATC ATCGTTACCG GAGTGACGCG GACCATCCGC
GAAGAGGCTC GCATGATGGC GCTGGCCCGG CAGAACGTGC AGGCGCAGGC CCTGGGCGAT
GCAGCCATCC AGTTGGCCCT GCAGGCCATC GTCGCCAACA ACACGCCCAT CAATCGCATG
CTGCAGTCGG AAATCCGCTA CGGAGGCGTC GCCATGCAGG TGCGGGCCAT GCCGCTGAAC
GGCCTCATCG ACATCAACAG CGCGCCGGTT CCGCTGCTGG CCAAGGTATA TGCGATCGCG
GGCGGCGTAC CTGCCGGGCA GGCGGACGCG TTGGCGCAGG CCACCGTGCA GGTCCGCGAG
CAGCGCGGTC CGGCGGGGCT GCAGGAGCGC TTCGAATCCG AGGAAGACCT GCTCAAGGTC
CCAGGGATCG ACTATGGCCT CTATGCTAGA CTTTTTCCCC TCGTCACTGC CGACTTGCGG
GGTAGGGGGC TGGTGAATCC CCTGGCCGCG CCCGTTGAGG TCCTGACGGT ACTGGCCAGC
GGGAATGCGG CCGCAGCCAG GGTCATCGCC GACAAGCGCG ACGCGGGTGA ACCGGGGGTG
GATACGAGTG CGCTCGACAG CGCTTTCCTC GATAGCTCCT CGGTTCGGCG GATCCGCATG
GAGGCCCGGG TTCCCATGCC GGACGGCACT TGGCTGCGCG TATCGCGCAG CGTCGATCTG
ACCGCACGCG CCCGTGATGG AGCTCCGTGG TATTCCTTCC GCACCGGGTC CAGCGTGGAG
CCGGTGGTCC GCAATCCCTG A
|
|---|
| Protein sequence | MRAPVHYRAG RSSRGMALIA VLWIVASLSI IVTGVTRTIR EEARMMALAR QNVQAQALGD
AAIQLALQAI VANNTPINRM LQSEIRYGGV AMQVRAMPLN GLIDINSAPV PLLAKVYAIA
GGVPAGQADA LAQATVQVRE QRGPAGLQER FESEEDLLKV PGIDYGLYAR LFPLVTADLR
GRGLVNPLAA PVEVLTVLAS GNAAAARVIA DKRDAGEPGV DTSALDSAFL DSSSVRRIRM
EARVPMPDGT WLRVSRSVDL TARARDGAPW YSFRTGSSVE PVVRNP
|
|---|
| |