| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3145 |
|---|
| Symbol | |
|---|
| ID | 3368666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 3771317 |
|---|
| End bp | 3772051 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637653490 |
|---|
| Product | general secretion pathway protein K, putative |
|---|
| Protein accession | YP_236215 |
|---|
| Protein GI | 66046374 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3156] Type II secretory pathway, component PulK |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.132735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGA CGGGCCAATC GCAGCGTGGT GTTGCGCTGC TGGTAGTGCT CTGGGTGCTG
GCGCTGCTGA GCCTGTTGCT CGGCGGGCTG GCCGGGTGGG TGCAACTGGA GAGTCGACAG
TCGCTCTGGT TGCGGCAAAA TACCCAGGCG CTGATGGCGG CCGAAGCTGG CATGAATATG
GCTGTACAGG GCTTGCTCGA TGCTGCGCAG CGCAAACGCT GGATTGCTGA CGGGCGTGTG
GTCTCGTTGC GTATGGATGA TACGCAACTG CTGGTGAGCA TCAGAAGCGA GAGGGGCAAG
CTGGACCTCA ACAGCGCGCC GGTCGCGGAT ATATCGCGTC TGCTGCAGGC CTGTGGCGCG
GCCAAGAATC AGGCCAGCGG TATCGCCCAG GTGCTGGAGT CGCAGCGCAA TGGCGGTCAG
TCACCGCTGC GGGTGGTAGA GGAAGTTCGC CAGCTGCCGG GCATGAACCA GGCGCTGTAT
GTTCGGCTGT TGCCGGAAAT AACATTATGG AGCGGCCTGG ATCGGCCCGA CCCGGCGTTC
GCTTCGGCGT TGCTGCGTCG GGCCTTGAAC CTGCCGAACC AGAGCGCGGT TGGAGCCGAC
CCCGGTGAGG TACTGGCCAT CGACACGCGC GCAGAACGAC CGGGCGGCGT GACCGCCCTG
TTACAGACCA CTGTTTTATT GAGCCCATCG GAGGGAGGCG CACAACCCTA CAGGGTGTTG
CGTTGGCAAG AATGA
|
|---|
| Protein sequence | MSMTGQSQRG VALLVVLWVL ALLSLLLGGL AGWVQLESRQ SLWLRQNTQA LMAAEAGMNM
AVQGLLDAAQ RKRWIADGRV VSLRMDDTQL LVSIRSERGK LDLNSAPVAD ISRLLQACGA
AKNQASGIAQ VLESQRNGGQ SPLRVVEEVR QLPGMNQALY VRLLPEITLW SGLDRPDPAF
ASALLRRALN LPNQSAVGAD PGEVLAIDTR AERPGGVTAL LQTTVLLSPS EGGAQPYRVL
RWQE
|
|---|
| |