More than 300 homologs were found in PanDaTox collection
for query gene PputGB1_3646 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_4042  glucose-6-phosphate 1-dehydrogenase  94.81 
 
 
501 aa  986    Pseudomonas putida KT2440  Bacteria  normal  0.0400337  normal 
 
 
-
 
NC_004578  PSPTO_3121  glucose-6-phosphate 1-dehydrogenase  76 
 
 
510 aa  795    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.243821  n/a   
 
 
-
 
NC_007005  Psyr_2988  glucose-6-phosphate 1-dehydrogenase  76.6 
 
 
510 aa  801    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.385814 
 
 
-
 
NC_009512  Pput_1796  glucose-6-phosphate 1-dehydrogenase  95.41 
 
 
501 aa  994    Pseudomonas putida F1  Bacteria  normal  0.427689  normal  0.725555 
 
 
-
 
NC_007492  Pfl01_2587  glucose-6-phosphate 1-dehydrogenase  76.72 
 
 
507 aa  797    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.641127  normal  0.232567 
 
 
-
 
NC_010501  PputW619_1831  glucose-6-phosphate 1-dehydrogenase  93.01 
 
 
501 aa  972    Pseudomonas putida W619  Bacteria  normal  normal  0.358825 
 
 
-
 
NC_010322  PputGB1_3646  glucose-6-phosphate 1-dehydrogenase  100 
 
 
501 aa  1041    Pseudomonas putida GB-1  Bacteria  normal  0.186748  normal  0.717991 
 
 
-
 
NC_010505  Mrad2831_4314  glucose-6-phosphate 1-dehydrogenase  54.56 
 
 
508 aa  536  1e-151  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.144524 
 
 
-
 
NC_011365  Gdia_2111  glucose-6-phosphate 1-dehydrogenase  54.75 
 
 
514 aa  533  1e-150  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.935632 
 
 
-
 
NC_012850  Rleg_0940  glucose-6-phosphate 1-dehydrogenase  52.83 
 
 
502 aa  534  1e-150  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_2451  glucose-6-phosphate 1-dehydrogenase  53.72 
 
 
507 aa  531  1e-150  Methylobacterium populi BJ001  Bacteria  normal  normal  0.807584 
 
 
-
 
NC_009475  BBta_p0094  glucose-6-phosphate 1-dehydrogenase  53.23 
 
 
508 aa  528  1e-149  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  0.27048 
 
 
-
 
NC_011369  Rleg2_0826  glucose-6-phosphate 1-dehydrogenase  52.93 
 
 
505 aa  527  1e-148  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.626494 
 
 
-
 
NC_011004  Rpal_4157  glucose-6-phosphate 1-dehydrogenase  51.87 
 
 
504 aa  525  1e-148  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.173775  n/a   
 
 
-
 
NC_010581  Bind_0458  glucose-6-phosphate 1-dehydrogenase  51.57 
 
 
535 aa  525  1e-148  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.155049  normal  0.143277 
 
 
-
 
NC_010511  M446_6708  glucose-6-phosphate 1-dehydrogenase  53.07 
 
 
507 aa  525  1e-148  Methylobacterium sp. 4-46  Bacteria  normal  0.0735699  normal 
 
 
-
 
NC_009485  BBta_6317  glucose-6-phosphate 1-dehydrogenase  51.38 
 
 
507 aa  525  1e-148  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.510788  normal 
 
 
-
 
NC_011365  Gdia_2351  glucose-6-phosphate 1-dehydrogenase  56.51 
 
 
510 aa  523  1e-147  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.751632  normal 
 
 
-
 
NC_010172  Mext_2523  glucose-6-phosphate 1-dehydrogenase  53.12 
 
 
502 aa  520  1e-146  Methylobacterium extorquens PA1  Bacteria  normal  0.817302  normal  0.204066 
 
 
-
 
NC_007964  Nham_3271  glucose-6-phosphate 1-dehydrogenase  52.11 
 
 
504 aa  520  1e-146  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2746  glucose-6-phosphate 1-dehydrogenase  53.32 
 
 
502 aa  520  1e-146  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0979783  normal 
 
 
-
 
NC_007406  Nwi_2643  glucose-6-phosphate 1-dehydrogenase  51.89 
 
 
504 aa  515  1.0000000000000001e-145  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7097  glucose-6-phosphate 1-dehydrogenase  52.82 
 
 
535 aa  516  1.0000000000000001e-145  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0215  glucose-6-phosphate 1-dehydrogenase  51.86 
 
 
535 aa  516  1.0000000000000001e-145  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7447  glucose-6-phosphate 1-dehydrogenase  52.47 
 
 
507 aa  511  1e-144  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.467542  n/a   
 
 
-
 
NC_007778  RPB_1890  glucose-6-phosphate 1-dehydrogenase  51.68 
 
 
504 aa  513  1e-144  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.414124  normal 
 
 
-
 
NC_007925  RPC_3672  glucose-6-phosphate 1-dehydrogenase  51.57 
 
 
504 aa  513  1e-144  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3476  glucose-6-phosphate 1-dehydrogenase  51.27 
 
 
503 aa  513  1e-144  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.320789 
 
 
-
 
NC_010622  Bphy_2400  glucose-6-phosphate 1-dehydrogenase  52.52 
 
 
528 aa  510  1e-143  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1439  glucose-6-phosphate 1-dehydrogenase  51.21 
 
 
503 aa  503  1e-141  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.074785  n/a   
 
 
-
 
NC_011891  A2cp1_2508  glucose-6-phosphate 1-dehydrogenase  51.01 
 
 
501 aa  501  1e-141  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2421  glucose-6-phosphate 1-dehydrogenase  50.81 
 
 
503 aa  501  1e-140  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_02888  glucose-6-phosphate 1-dehydrogenase  52.16 
 
 
585 aa  476  1e-133  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1275  glucose-6-phosphate 1-dehydrogenase  49.6 
 
 
534 aa  475  1e-133  Acidiphilium cryptum JF-5  Bacteria  normal  0.685141  n/a   
 
 
-
 
NC_009675  Anae109_3326  glucose-6-phosphate 1-dehydrogenase  48.59 
 
 
505 aa  469  1.0000000000000001e-131  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0774281  normal 
 
 
-
 
NC_011831  Cagg_3190  glucose-6-phosphate 1-dehydrogenase  48.89 
 
 
513 aa  471  1.0000000000000001e-131  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.767054 
 
 
-
 
NC_009523  RoseRS_2562  glucose-6-phosphate 1-dehydrogenase  48.8 
 
 
513 aa  458  9.999999999999999e-129  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1852  glucose-6-phosphate 1-dehydrogenase  47.05 
 
 
518 aa  449  1e-125  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.214037  normal  0.860492 
 
 
-
 
NC_008148  Rxyl_0051  glucose-6-phosphate 1-dehydrogenase  46.92 
 
 
510 aa  446  1.0000000000000001e-124  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2334  glucose-6-phosphate 1-dehydrogenase  46.79 
 
 
511 aa  435  1e-121  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2812  glucose-6-phosphate 1-dehydrogenase  45.44 
 
 
514 aa  438  1e-121  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3427  glucose-6-phosphate 1-dehydrogenase  47.39 
 
 
509 aa  438  1e-121  Cyanothece sp. PCC 7425  Bacteria  normal  0.349036  normal  0.556859 
 
 
-
 
NC_013161  Cyan8802_3858  glucose-6-phosphate 1-dehydrogenase  45.38 
 
 
509 aa  432  1e-120  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_3806  glucose-6-phosphate 1-dehydrogenase  45.38 
 
 
509 aa  432  1e-120  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007517  Gmet_2619  glucose-6-phosphate 1-dehydrogenase  46.49 
 
 
512 aa  432  1e-120  Geobacter metallireducens GS-15  Bacteria  normal  0.930273  normal 
 
 
-
 
NC_013525  Tter_0413  glucose-6-phosphate 1-dehydrogenase  46 
 
 
514 aa  435  1e-120  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_1682  glucose-6-phosphate 1-dehydrogenase  44.49 
 
 
509 aa  427  1e-118  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_2062  glucose-6-phosphate 1-dehydrogenase  45.25 
 
 
507 aa  425  1e-118  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.155375  n/a   
 
 
-
 
NC_013132  Cpin_1481  glucose-6-phosphate 1-dehydrogenase  44.73 
 
 
501 aa  424  1e-117  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.0000384376  normal  0.373558 
 
 
-
 
NC_008312  Tery_0684  glucose-6-phosphate 1-dehydrogenase  44.78 
 
 
509 aa  423  1e-117  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.10488 
 
 
-
 
NC_011729  PCC7424_1498  glucose-6-phosphate 1-dehydrogenase  44.18 
 
 
509 aa  419  1e-116  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000000000268393 
 
 
-
 
NC_009972  Haur_3021  glucose-6-phosphate 1-dehydrogenase  43.75 
 
 
508 aa  420  1e-116  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0908495  n/a   
 
 
-
 
NC_013730  Slin_2700  glucose-6-phosphate 1-dehydrogenase  45.45 
 
 
499 aa  419  1e-116  Spirosoma linguale DSM 74  Bacteria  normal  0.130161  normal  0.149418 
 
 
-
 
NC_008609  Ppro_2250  glucose-6-phosphate 1-dehydrogenase  44.18 
 
 
502 aa  419  1e-116  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000181168  n/a   
 
 
-
 
NC_007519  Dde_3471  glucose-6-phosphate 1-dehydrogenase  44.42 
 
 
513 aa  417  9.999999999999999e-116  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_1091  glucose-6-phosphate 1-dehydrogenase  43.9 
 
 
509 aa  414  1e-114  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2210  glucose-6-phosphate 1-dehydrogenase  42.97 
 
 
507 aa  409  1e-113  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000230024  n/a   
 
 
-
 
NC_007644  Moth_2302  glucose-6-phosphate 1-dehydrogenase  46.45 
 
 
504 aa  410  1e-113  Moorella thermoacetica ATCC 39073  Bacteria  decreased coverage  0.00258738  normal 
 
 
-
 
NC_009439  Pmen_4486  glucose-6-phosphate 1-dehydrogenase  44.06 
 
 
499 aa  409  1e-113  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_1133  glucose-6-phosphate 1-dehydrogenase  40.73 
 
 
520 aa  410  1e-113  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA2971  glucose-6-phosphate 1-dehydrogenase  45.49 
 
 
494 aa  407  1.0000000000000001e-112  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6016  Glucose-6-phosphate dehydrogenase  43.46 
 
 
545 aa  408  1.0000000000000001e-112  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.558765 
 
 
-
 
NC_008025  Dgeo_1974  glucose-6-phosphate 1-dehydrogenase  44.73 
 
 
560 aa  407  1.0000000000000001e-112  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.588725 
 
 
-
 
NC_013131  Caci_2244  glucose-6-phosphate 1-dehydrogenase  41.94 
 
 
540 aa  403  1e-111  Catenulispora acidiphila DSM 44928  Bacteria  normal  hitchhiker  0.0000605955 
 
 
-
 
NC_014158  Tpau_4207  glucose-6-phosphate 1-dehydrogenase  43.26 
 
 
492 aa  402  1e-111  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5182  glucose-6-phosphate 1-dehydrogenase  42.8 
 
 
502 aa  404  1e-111  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.875269  normal  0.100868 
 
 
-
 
NC_008709  Ping_2754  glucose-6-phosphate 1-dehydrogenase  43.47 
 
 
499 aa  403  1e-111  Psychromonas ingrahamii 37  Bacteria  normal  0.0743068  normal 
 
 
-
 
NC_002947  PP_5351  glucose-6-phosphate 1-dehydrogenase  43.12 
 
 
485 aa  399  9.999999999999999e-111  Pseudomonas putida KT2440  Bacteria  normal  0.317801  normal  0.031932 
 
 
-
 
NC_007404  Tbd_2122  glucose-6-phosphate 1-dehydrogenase  44.2 
 
 
496 aa  401  9.999999999999999e-111  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_5259  glucose-6-phosphate 1-dehydrogenase  43.12 
 
 
480 aa  399  9.999999999999999e-111  Pseudomonas putida F1  Bacteria  normal  normal  0.559368 
 
 
-
 
NC_009456  VC0395_0341  glucose-6-phosphate 1-dehydrogenase  43.18 
 
 
501 aa  399  9.999999999999999e-111  Vibrio cholerae O395  Bacteria  decreased coverage  0.00000000308614  n/a   
 
 
-
 
NC_010571  Oter_3908  glucose-6-phosphate 1-dehydrogenase  44.05 
 
 
512 aa  400  9.999999999999999e-111  Opitutus terrae PB90-1  Bacteria  normal  0.313337  normal  0.337503 
 
 
-
 
NC_008578  Acel_1124  glucose-6-phosphate 1-dehydrogenase  42.54 
 
 
508 aa  399  9.999999999999999e-111  Acidothermus cellulolyticus 11B  Bacteria  normal  decreased coverage  0.00734175 
 
 
-
 
NC_013411  GYMC61_0348  glucose-6-phosphate 1-dehydrogenase  43.55 
 
 
494 aa  399  9.999999999999999e-111  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_5400  glucose-6-phosphate 1-dehydrogenase  43.67 
 
 
480 aa  399  9.999999999999999e-111  Pseudomonas putida GB-1  Bacteria  normal  0.887307  normal  0.016142 
 
 
-
 
NC_007333  Tfu_2005  glucose-6-phosphate 1-dehydrogenase  42.54 
 
 
534 aa  397  1e-109  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0772  glucose-6-phosphate 1-dehydrogenase  43.27 
 
 
490 aa  395  1e-109  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0872  glucose-6-phosphate 1-dehydrogenase  43.99 
 
 
493 aa  398  1e-109  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4431  glucose-6-phosphate 1-dehydrogenase  43.09 
 
 
487 aa  395  1e-109  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_5128  glucose-6-phosphate 1-dehydrogenase  42.65 
 
 
480 aa  395  1e-109  Pseudomonas putida W619  Bacteria  normal  normal  0.206455 
 
 
-
 
NC_014151  Cfla_1936  glucose-6-phosphate 1-dehydrogenase  41.9 
 
 
513 aa  393  1e-108  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0192784  normal 
 
 
-
 
NC_009921  Franean1_2073  glucose-6-phosphate 1-dehydrogenase  43.72 
 
 
510 aa  393  1e-108  Frankia sp. EAN1pec  Bacteria  normal  0.398009  normal  0.0869756 
 
 
-
 
NC_009953  Sare_3319  glucose-6-phosphate 1-dehydrogenase  43.39 
 
 
505 aa  393  1e-108  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_012560  Avin_02020  glucose-6-phosphate 1-dehydrogenase  42.97 
 
 
485 aa  392  1e-108  Azotobacter vinelandii DJ  Bacteria  normal  0.641659  n/a   
 
 
-
 
NC_009783  VIBHAR_02429  glucose-6-phosphate 1-dehydrogenase  42.48 
 
 
526 aa  391  1e-107  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007498  Pcar_0924  glucose-6-phosphate 1-dehydrogenase  44.38 
 
 
499 aa  392  1e-107  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1983  glucose-6-phosphate 1-dehydrogenase  42.63 
 
 
529 aa  389  1e-107  Thermobispora bispora DSM 43833  Bacteria  normal  0.1665  normal  0.69024 
 
 
-
 
NC_008309  HS_1651  glucose-6-phosphate 1-dehydrogenase  41.34 
 
 
496 aa  390  1e-107  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_3092  glucose-6-phosphate 1-dehydrogenase  44.14 
 
 
505 aa  390  1e-107  Salinispora tropica CNB-440  Bacteria  normal  normal  0.325189 
 
 
-
 
NC_009668  Oant_3956  glucose-6-phosphate 1-dehydrogenase  43.8 
 
 
491 aa  389  1e-107  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1661  glucose-6-phosphate 1-dehydrogenase  40.04 
 
 
496 aa  387  1e-106  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_002620  TC0457  glucose-6-phosphate 1-dehydrogenase  40.08 
 
 
507 aa  385  1e-106  Chlamydia muridarum Nigg  Bacteria  unclonable  0.00414605  n/a   
 
 
-
 
NC_004311  BRA0778  glucose-6-phosphate 1-dehydrogenase  44 
 
 
491 aa  385  1e-106  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_11641  glucose-6-phosphate 1-dehydrogenase  42.2 
 
 
507 aa  388  1e-106  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.789994  n/a   
 
 
-
 
NC_007348  Reut_B5329  glucose-6-phosphate 1-dehydrogenase  42.45 
 
 
482 aa  385  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  0.331705  n/a   
 
 
-
 
NC_013456  VEA_003323  glucose-6-phosphate 1-dehydrogenase  42.07 
 
 
500 aa  388  1e-106  Vibrio sp. Ex25  Bacteria  normal  0.899023  n/a   
 
 
-
 
NC_013422  Hneap_0996  glucose-6-phosphate 1-dehydrogenase  42.13 
 
 
504 aa  386  1e-106  Halothiobacillus neapolitanus c2  Bacteria  normal  0.958269  n/a   
 
 
-
 
NC_007777  Francci3_1647  glucose-6-phosphate 1-dehydrogenase  43.43 
 
 
510 aa  386  1e-106  Frankia sp. CcI3  Bacteria  normal  0.336303  normal 
 
 
-
 
NC_007954  Sden_2079  glucose-6-phosphate 1-dehydrogenase  41.43 
 
 
490 aa  386  1e-106  Shewanella denitrificans OS217  Bacteria  normal  0.0300495  n/a   
 
 
-
 
NC_009976  P9211_11141  glucose-6-phosphate 1-dehydrogenase  42.38 
 
 
507 aa  388  1e-106  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
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