Gene Slin_2700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2700 
Symbol 
ID8726450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3265797 
End bp3267296 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content53% 
IMG OID 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_003387515 
Protein GI284037585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.130161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.149418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCAG CTACTAATCA GCGTCCACCG GCTACCATCC TGTTTATCTT TGGGGGAAGC 
GGTGATTTGA ACCTTCGCAA ACTGACTCCG GCGCTCTACA ATTTATACCT CGATAACTAC
CTTTCCGATC GTTTTTCGGT GGTTGGGTTA GGGCGAAGCG ACTATTCGGA TGAGTCGTTT
CGGGAGCGGT TACTCGAAGG AGTTCAATCA TTTTCGCGCC GTAAAAATGG CCCTGACGAT
ATCTGGGCCT CGTTTTCCAA AACGATTACG TATTTGCAGA TGGACGCTGC CGATGACGGG
GCCTATGCAA AATTAAGCGA ATATGTGTCG GCAAAAGAGG AGGAATGGGG TGTACAGGCA
AATATTGTTT TCTATCTCGC CGTAGCCCCC CAGCTCGTGC CGGGTATTGC CACTAACCTC
GGCAAACTAC CCCTGTGCTG TGAAAAATCC AGGGTTCGGA TCGTGGTCGA AAAACCGTTT
GGACACGACC TCAAAACGGC TCAGGAACTC AACAACCTGC TGGGTGGCTT GTTTGCCGAA
GAACAGATTT ACCGAATCGA CCATTACCTG GGCAAAGAAA CGGTGCAGAA TATTCTGGCC
CTTCGATTTG CTAACTCCCT GTTCGAGCCC ATCTGGAATC GCCGGTATGT TGCTTATATT
CAGATAACCG CTTCCGAAAC CGTTGGGCTG GAAGGACGGG GTGGCTACTA CGAAGGGTCG
GGTGCCTTAC GCGACATGAT CCAGAACCAC CTGCTTCAGG TGCTGTGCAT GGTGGCTACC
GAAGCGCCTA TTTCTTTTGA AGCTAACGAA GTACGGAACA AAACCGTCGA CGTACTGAAC
GCCATTCGCC GGATAAAGCC CGAGCAGGTG AACGAAGTTG CCGTTCGGGG GCAGTACGGT
CCCGGCCAGA AAGATGGCAA GTCGACGCCG GGCTATCGGG AAGAGGAAGG CGTGAAGCCG
GATTCTAAAA CGGAGACATT TGCCGCCGTG AAGCTATTTG TCGACAACTG GCGTTGGGAA
GATGTGCCGT TTTACCTGCG TACGGGTAAG TCGCTTCCCG AAAAAGCCAC CGTTATCACA
ATTCAGTTCA AACCCGCTCC ATACTACGCC TTTCCCGAAG AAGCAACGAA CGGCTGGCAG
TCTAACCGAC TGACTATCGG CATTCAGCCC GGTATGGACA TCCGGTTGCG GTTTCAGGCC
AAACGGCCCG GTCAAACGCT TGCCATCGAC CCTGTTGAGA TGGTATTCAG CTACAAAGAT
GCTTACGAAG GACAGGAGCC GGAAGCCTAC GAAACCCTGC TGCTGGACGT TATGACCGGC
GATGCCACGC TGTTTATGCG CGCCGATCAG GTGGAGGCCG CCTGGAAAGT CGTGACGCCG
ATTCTGGAAG CCTGGGAAGC CGAAACGCCC GATTTTCCGA ATTACGAACC CGGTTCGTGG
GGCCCTGAAG CCGCTGCGCA ACTCGTTGAG AAAGACGGCT TTTCCTGGAT GATGAAATAA
 
Protein sequence
MIPATNQRPP ATILFIFGGS GDLNLRKLTP ALYNLYLDNY LSDRFSVVGL GRSDYSDESF 
RERLLEGVQS FSRRKNGPDD IWASFSKTIT YLQMDAADDG AYAKLSEYVS AKEEEWGVQA
NIVFYLAVAP QLVPGIATNL GKLPLCCEKS RVRIVVEKPF GHDLKTAQEL NNLLGGLFAE
EQIYRIDHYL GKETVQNILA LRFANSLFEP IWNRRYVAYI QITASETVGL EGRGGYYEGS
GALRDMIQNH LLQVLCMVAT EAPISFEANE VRNKTVDVLN AIRRIKPEQV NEVAVRGQYG
PGQKDGKSTP GYREEEGVKP DSKTETFAAV KLFVDNWRWE DVPFYLRTGK SLPEKATVIT
IQFKPAPYYA FPEEATNGWQ SNRLTIGIQP GMDIRLRFQA KRPGQTLAID PVEMVFSYKD
AYEGQEPEAY ETLLLDVMTG DATLFMRADQ VEAAWKVVTP ILEAWEAETP DFPNYEPGSW
GPEAAAQLVE KDGFSWMMK