Gene RoseRS_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2562 
Symbol 
ID5209531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3176460 
End bp3178001 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content61% 
IMG OID640596166 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_001276888 
Protein GI148656683 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGC CTGCACTCAC CGTCAATCCG TTGCGTTCGG GCATACGGAT GCAACGCACA 
CCGCCGCCAT GCACGGTGGT CATCTTTGGC GCGACGGGCG ATCTGACCCA TCGGAAACTC
ATCCCGGCGC TGTATCAACT TCAGCGAGAA CGGTTGCTTC CGCCGGGATT CAGCGTCGTA
GGGTTTGCCC GGCGCGACTG GAGCGACGAC TATTTTCGCG AGTCGTTGTT GCAGAGCGCG
CGCCAGCATG CGCGCGCTGG TATCGATGAT GCGTTGTGGC AGGGCTTCGC TGCCGGTTGT
TTCTACATTC GTTCGGCGTT CGACGACCCG CAGGGATATA TGGCGCTTGC CGGTCGCCTC
GATCAACTCG ATGCTGCGCG GGGCACAGGC GGTAACCGCC TCTTCTACCT GGCGACGCCG
CCTGAGTCGT ATGCCGAAAT CGTGCAGCGA TTGGGTGAAG CCGGTCTGAA CCGCTCGCCG
AACGGCGGAT GGACGCGCAT CATCATCGAG AAACCGTTTG GGTCGGATCT GGAGAGTGCA
AAGGCGCTCG ACCGCGTGGT GCATCAGGTG TTCGAGGAAC GGCAGATCTA TCGGATCGAT
CACTACCTGG GCAAGGAGAC CGTTCAGAAT ATCCTGGTGT TTCGCTTTGC CAACGGTATT
TTCGAGCCGC TCTGGAATCG CCGCTACGTC GATCATGTGC AGATCACCGT TGCCGAAAGC
GTCGGCGTCG AAGGTCGCGG CGGTTACTAC GACCGCACCG GCGCCCTGCG CGATATGGTG
CAGAACCATT TGTTGCAACT GCTCTCGTTG ACCGCGATGG AGCCGCCCGT TGGATACCGC
GCCGATGCAG TGCGGGATGA GAAGGTCAAA GTGTTGCGCG CAGTTCGTCC GATAGAGCCG
ACGGAGGTCG AGCAGGCGAC GGTGCGCGGG CAGTACGGCG CCGGAGCGGT TGGCGGCGTG
CCTGTGCCGG GGTATCGTGA AGAGCCGGGG GTCGCTCCCG ATTCGCATAC CGAGACGTTT
GTGGCGCTGC GGTTGTACAT CGAGAGCTGG CGCTGGGCAG GGGTGCCATT CTTTTTGCGC
ACCGGTAAAC GGTTGCCCAA ACGTGTCAGT GAGATTGCTA TTCAATTCAA AATGGCGCCG
CTCATGCTGT TCGAAAATGG TCCTCTCAGC GGCATCGAGC CGAATGTGCT GGCGATCAAC
ATCCAGCCAG ATGAAGGGAT CTCGCTGCGG TTCGCGTCCA AAGTTCCCGG TCAGTCGAAC
ATCATCCGTC CGGTCATGAT GAACTTTCGC TATAACGCAG CATTCGGCGT CGAGTCTCCC
GAAGCGTATG AAAGATTGCT GCTGGATGCC CTGCTGGGCG ACTCGACGCT GTTCATCCGG
AGCGACGAGG TTGAAGCCAT GTGGTCGTTG CTCGATCCGG TGCTCGAGGG GTGGGCGGCA
GCGCCGCCGC CAGCGTTCCC CAATTACAGC GCAGGGAGTT GGGGACCCGC GCGCGCCGAT
GATCTGATCG CGTCCGCCGG GGCGAAATGG AGGCGGTTGT GA
 
Protein sequence
MNTPALTVNP LRSGIRMQRT PPPCTVVIFG ATGDLTHRKL IPALYQLQRE RLLPPGFSVV 
GFARRDWSDD YFRESLLQSA RQHARAGIDD ALWQGFAAGC FYIRSAFDDP QGYMALAGRL
DQLDAARGTG GNRLFYLATP PESYAEIVQR LGEAGLNRSP NGGWTRIIIE KPFGSDLESA
KALDRVVHQV FEERQIYRID HYLGKETVQN ILVFRFANGI FEPLWNRRYV DHVQITVAES
VGVEGRGGYY DRTGALRDMV QNHLLQLLSL TAMEPPVGYR ADAVRDEKVK VLRAVRPIEP
TEVEQATVRG QYGAGAVGGV PVPGYREEPG VAPDSHTETF VALRLYIESW RWAGVPFFLR
TGKRLPKRVS EIAIQFKMAP LMLFENGPLS GIEPNVLAIN IQPDEGISLR FASKVPGQSN
IIRPVMMNFR YNAAFGVESP EAYERLLLDA LLGDSTLFIR SDEVEAMWSL LDPVLEGWAA
APPPAFPNYS AGSWGPARAD DLIASAGAKW RRL