Gene Pput_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1796 
Symbol 
ID5191777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2060952 
End bp2062457 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content63% 
IMG OID640586264 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_001267133 
Protein GI148547031 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.427689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.725555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAC AGACCCTTGC GGCCGCCCCC CCTTGTACCC TGTTCCTGTT CGGCGCCAAT 
GGCGACCTGG TCAAGCGCCT GCTGATGCCC GCGCTGTACA ACCTCAGCCG CGACGGTTTG
CTGGACCGTA ACCTGCGCAT CGTCGGCGTC GACCATAACC CGGCCAGCGC CGAGGATTTC
GCCGCGCGCC TGCACGCGTT CATGGTCGAG CGTGACAAAG GAAGCGAGGG CAGCGCCAAG
TGCCTGGACG AGAAACTATG GGCCCGCCTG GCCAAGCGCC TGGATTATCA GACGGGCGAC
TTTCTCGATC CGGCCACCTA CCAGGCCCTG GCCAGGCGCA TCGACAAGAC CCGCCACGGC
AATGCCATTT TCTATCTGGC CACGTCGCCG CGCTTCTTCC CCGAGGTGGC GCAGCGCCTG
GGGCAGGCCG GCCTGCTGGA CGAGTCTGCC GGCGGCTTTC GCCGGGTGGT GGTTGAAAAA
CCGTTCGGCA CCGACCTGGC CAGCGCCGAG GCGCTCAACG CCTGCCTGCT GAAGGTGATG
GGCGAGCGGC AGATCTACCG CATCGACCAT TACCTGGGCA AAGAGACGGT GCAGAATATT
CTGGTCAGCC GCTTTTCCAA CGGCCTGTTC GAATCGTTCT GGAACAACCA CTACATCGAC
CACGTGCAGA TCACCGCAGC GGAAACCGTC GGTGTCGAGA CCCGTGGTGC GTTCTATGAC
AGCACCGGCG CCCTGCGCGA CATGGTGCCC AACCACCTGT TCCAGTTGCT GGCGATGGTG
GCCATGGAGC CGCCGGCCGC GTTCGGTGCC GATGCGGTGC GCGGTGAAAA AGCCAAGGTG
GTCGGCGCTA TTCGCCCATG GTCGGCAAAA ATGGCCCTGA AGAACTCCGT GCGAGGCCAG
TACAGCGCTG GCAAGCAGGG GCGCAAGCCG TTGCCAGGCT ACCGTCAGGA GGCCAACGTC
GCGCCGGATA GCCAGACCGA GACCTACGTG GCGCTGAAGG TGATGATCGA CAACTGGCGC
TGGGCCGGCG TGCCATTTTA CCTGCGCACC GGCAAGCGCA TGAGCGTGCG TGACACCGAG
ATTGCCATCT GCTTCAAGCC CGCACCGTAT GCGCAGTTTC GCGAGTCGGA GCTGGAACGG
CCCAAACCCA ACTACCTGAA AATCCAGATC CAGCCCAATG AAGGCATGTG GTTCGATCTG
CAAGCCAAAC GGCCCGGGCC AGAGCTGGTG ATGGAGAATG TCGAGTTGGG TTTTGCCTAC
AAGGACTTCT TCAAGATGAC CCCGGCCACT GGCTACGAGA CGCTGATCTA TGACTGCCTG
ACCGGTGACC AGACCCTGTT CCAGCGGGCT GACAACATCG AAAACGGCTG GCGAGCGGTG
CAGCCGTTTC TCGATGCCTG GGCCCAGGGC GGCGAAGTGC ATGAGTACTC GGCTGGCGAA
GATGGGCCTG AGGCCGGCAA TGAATTGCTG ACCCGCGACA AGCGGGAGTG GCACCGGTTG
GGGTGA
 
Protein sequence
MTKQTLAAAP PCTLFLFGAN GDLVKRLLMP ALYNLSRDGL LDRNLRIVGV DHNPASAEDF 
AARLHAFMVE RDKGSEGSAK CLDEKLWARL AKRLDYQTGD FLDPATYQAL ARRIDKTRHG
NAIFYLATSP RFFPEVAQRL GQAGLLDESA GGFRRVVVEK PFGTDLASAE ALNACLLKVM
GERQIYRIDH YLGKETVQNI LVSRFSNGLF ESFWNNHYID HVQITAAETV GVETRGAFYD
STGALRDMVP NHLFQLLAMV AMEPPAAFGA DAVRGEKAKV VGAIRPWSAK MALKNSVRGQ
YSAGKQGRKP LPGYRQEANV APDSQTETYV ALKVMIDNWR WAGVPFYLRT GKRMSVRDTE
IAICFKPAPY AQFRESELER PKPNYLKIQI QPNEGMWFDL QAKRPGPELV MENVELGFAY
KDFFKMTPAT GYETLIYDCL TGDQTLFQRA DNIENGWRAV QPFLDAWAQG GEVHEYSAGE
DGPEAGNELL TRDKREWHRL G