| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5400 |
|---|
| Symbol | |
|---|
| ID | 5873215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 6028109 |
|---|
| End bp | 6029551 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641550536 |
|---|
| Product | glucose-6-phosphate 1-dehydrogenase |
|---|
| Protein accession | YP_001671617 |
|---|
| Protein GI | 167036386 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.887307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.016142 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTATTC CTTGCGACAT TCTGGTGTTC GGTGGCACGG GCGACCTGGC CCTGCACAAA
TTGCTTCCGG CGCTCTACCA TTTGTATCGC GAGGCGCGCC TGAACAACGC GGTACGCATC
ATTGCCCTCG CCCGCCGCAA CATCAGCCGT AACGAATACC TCAAGCTCGC AGAACGGCAT
TGCCGGGCGC AGATTGCCCG CACCGACTTC GACGAAGATG TGTGGCAACG CTTTGCCGCG
CGCCTCGACT ACTTCCCCAT GGATGCCTCG CAAAGCGCCG ACTTCGGTCG CCTGGCGCGC
TACCTCGGCG AGCCTGGCGG GCTGACCCGC GTCTTCTACC TGGCCACCGC GCCCTCCCTG
TTCGTGCCAA TCGCCAACCA CTTGCGTATT TCCGGGCTGG CCGACAGCGA GGCGCGCATT
GTGCTGGAAA AGCCCATTGG CCATTCACAG CACTCGGCCA CCGCCATCAA CGAAGCGATC
GGCGCCGTGT TCGAAGAACC CCAGGTGTTT CGCATTGATC ACTACCTGGG CAAGGAAACC
GTGCAGAACC TCATGGCGCT GCGCTTTGCC AACGCCCTGC TTGAACCTGT GTGGCGCAAC
GGCCAGGTCG ATCATGTGCA GATCAGCGCC TGCGAAACCC TCGGTGTAGA GAACCGCGGC
GGGTACTACG ACCGTGCCGG GGCAACCCGC GACATGCTCC AGAACCACTT GCTGCAGCTG
CTGTGCCTGG TGGCCATGGA GCCACCCGCG CAGTTCGAAG CCGAGGCCGT GCGCGACGAG
AAAGTGAAGG TCCTGCGTGC CCTCAAGCCC ATTACTGGGC AGGACGTACA GGACAAGACC
GTGCGTGGTC AGTACGGTGC CGGCTACATC GGTGGCCAGG AAGTGCCGGC CTATTACTTC
GAAAAGGACG TGGACAACGA CAGCGATACC GAAACCTTTG TGGCCGTTCA GGCGCACATC
GACAATTGGC GCTGGGCTGG CGTGCCGTTC TACCTGCGCA CCGGCAAGCG CATGGCGCGG
CGCACTTCGC AGATCGTCAT CCAGTTCAAG CCTGTGCCCC ATGAGCTTTT CAGCGGCGGC
CAGGTCAACC AGCTGTTGAT CCAGCTGCAA CCGGACGAAC GCATCAGCCT GCGCATGATG
ACCAAAAGCC CCGGCAAAGG CATGCGACTG GAGCCGGTGG ACCTGGACCT CAACCTGGCC
CAGGTGTTCG GCCAGACCCG TCGTTGGGGT GCTTACGAAC GCCTGCTGCT GGACATCCTG
GAAGGCGACT CGACGCTGTT CATGCGGCGT GATGAAGTGG AAGCGGCCTG GGCGTGGGTC
GACCCGATCA TCAAGGGCTG GGAAGAGCAC TTTCAGGCGC CACGCCATTA CCCGGCGGGC
AACAACGGCC CGGAGCAGGC CAACAGCCTA CTGGCGCGGC ATGGCAGGCA CTGGCACAGC
TGA
|
|---|
| Protein sequence | MTIPCDILVF GGTGDLALHK LLPALYHLYR EARLNNAVRI IALARRNISR NEYLKLAERH
CRAQIARTDF DEDVWQRFAA RLDYFPMDAS QSADFGRLAR YLGEPGGLTR VFYLATAPSL
FVPIANHLRI SGLADSEARI VLEKPIGHSQ HSATAINEAI GAVFEEPQVF RIDHYLGKET
VQNLMALRFA NALLEPVWRN GQVDHVQISA CETLGVENRG GYYDRAGATR DMLQNHLLQL
LCLVAMEPPA QFEAEAVRDE KVKVLRALKP ITGQDVQDKT VRGQYGAGYI GGQEVPAYYF
EKDVDNDSDT ETFVAVQAHI DNWRWAGVPF YLRTGKRMAR RTSQIVIQFK PVPHELFSGG
QVNQLLIQLQ PDERISLRMM TKSPGKGMRL EPVDLDLNLA QVFGQTRRWG AYERLLLDIL
EGDSTLFMRR DEVEAAWAWV DPIIKGWEEH FQAPRHYPAG NNGPEQANSL LARHGRHWHS
|
|---|
| |