| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3908 |
|---|
| Symbol | |
|---|
| ID | 6207127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5071207 |
|---|
| End bp | 5072745 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641693576 |
|---|
| Product | glucose-6-phosphate 1-dehydrogenase |
|---|
| Protein accession | YP_001820782 |
|---|
| Protein GI | 182415716 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.313337 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.337503 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATA CACAGCGGCA TCCCTTCCTT CACGGACTGA GCAAGCACCG CGGCGCTCCC
CCGACCGTCG TGGTGATTTT CGGCGCCTCC GGCGATCTCA CCGCGCGCAA ACTCATTCCG
GCGGTCTACA ACCTCGGCGT CGATGGCTTG CTGCCGGCCG ACTTCTATCT GGTCGGCTAT
GGCCGGAAGC CGATTCCGGA CGACGAGTTC CGCGGGCTGG CGGCCGAGGC AATCAAGGAG
TTTTCCCGGC GTGAATTGGT GCCCGCGGTG TGGGACCGGT TGGCGGCGCG CACGAGCTAT
GTGGCGGGTG GCTACGACGA AAGGCCGGCG TTCGACCGGC TCGCGCAGCA CCTTGCCGAG
ATCGAGAAGC AGCTCGGCCG GCCGCTGCAG ACGTTGTTCT ACATTTCCAC GCCGCCGTCG
GTGTTCGCGC CCATCATCGC GAATCTCGGC GCGAGCGGAC TGGCGGCGCG CTACGTCGGC
GAGCCGCATC AGGCCAAGGT GATCGTCGAA AAACCCTTCG GCAAGGACCT CGCCTCGGCG
CGGGCGCTCA ACGCCACGCT CCGCGGCGTG TTCGAGGAGC ACCAGGTCTA CCGCATCGAC
CACTACCTCG GCAAAGAGAC GGTGCAGGAT TTGTTGGTGC AGCGATTCGC CAACGCGATC
TTCGAGCCGC TGTGGAACCG GAACTTCATC GACAACGTGC AGATCACCGT GGCGGAGGAG
GTCGGCGTGG GCAGCCGCGG CGGCTATTAC GAGCAGAGCG GCGCGTTGCG GGACATGATC
CAGAATCACA CGATGCAACT CCTCGCGTTG ACCGCCATGG AGCCGCCGGT GTCGCTCGGG
GCGGAATCGA TCCGCGACGA GAAGGTGAAG CTGTTGAAGG CCATTCAGCC GCTGGATCTG
GGGCCCAACG GCGACGTGGC CCGCGCGCAG TATGGCGCCG GGATGACGGG CGGGAGAAAG
GTGCGCGGCT ATCTCGAGGA GGAGGGGATC GCGGCGAACT CGGCGACGGA GACCTACGCG
GCGCTGCGGC TTTCGATCAA CAACTGGCGC TGGCAGGGCG TGCCGTTCTA CCTGCGCTCG
GGAAAACGGA TGGCGCGTCG CGTGTCGGAG ATCGCGATCA ATTTCAAGCG GCCGCCCGGT
ACATTGTTCG CCGCGGGTGA CGAGTTCGAT CTGGCGGCGA ACACGCTGTC GTTCCAGATT
CAGCCAGACG AAGGTCTCGG CGTGATCCTC AATGCGAAGG TGCCGGGCCT CGAGACGCGG
ACGCAGCCGG TGAAGATGAG CTTCCGCTAT GCGACGACGT TCGGCTCGAA CACGCCCGAA
GCCTACGAGC GGCTCGTGCT GGATGCGATG GTCGGCGACG GCACGCTCTT TATCCGCGGC
GACGAGACGG AGGCGTCGTG GCGCTTGTGC ACGCCGGTGT TGGAAGCGTG GGCGGCGGCC
GGTCCCCAAG GCATGGACAC GTATCCCGCT GGATCATGGG GCCCGCCGGC GGCCGAAACG
TTGCTCGCGC GCAACGGACA TCACTGGAGG AAGCCATGA
|
|---|
| Protein sequence | MSDTQRHPFL HGLSKHRGAP PTVVVIFGAS GDLTARKLIP AVYNLGVDGL LPADFYLVGY
GRKPIPDDEF RGLAAEAIKE FSRRELVPAV WDRLAARTSY VAGGYDERPA FDRLAQHLAE
IEKQLGRPLQ TLFYISTPPS VFAPIIANLG ASGLAARYVG EPHQAKVIVE KPFGKDLASA
RALNATLRGV FEEHQVYRID HYLGKETVQD LLVQRFANAI FEPLWNRNFI DNVQITVAEE
VGVGSRGGYY EQSGALRDMI QNHTMQLLAL TAMEPPVSLG AESIRDEKVK LLKAIQPLDL
GPNGDVARAQ YGAGMTGGRK VRGYLEEEGI AANSATETYA ALRLSINNWR WQGVPFYLRS
GKRMARRVSE IAINFKRPPG TLFAAGDEFD LAANTLSFQI QPDEGLGVIL NAKVPGLETR
TQPVKMSFRY ATTFGSNTPE AYERLVLDAM VGDGTLFIRG DETEASWRLC TPVLEAWAAA
GPQGMDTYPA GSWGPPAAET LLARNGHHWR KP
|
|---|
| |